RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PDLIM5Q96HC4 596 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 CCDC138Q96M89 665 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 PTPN18Q99952 460 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 WDR12Q9GZL7 423 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 MAGEH1Q9H213 219 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 MAGIXQ9H6Y5 334 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 ACTR8Q9H981 624 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 AKIP1Q9NQ31 210 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 WARS2Q9UGM6 360 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 LIMD1Q9UGP4 676 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 FKBPLQ9UIM3 349 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 CCL27Q9Y4X3 112 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 INSIG1O15503 277 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 NOBOXO60393 691 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 UGT2B11O75310 529 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 HOXB6P17509 224 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 RGRP47804 291 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 NRIP1P48552 1158 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 RPS3AP61247 264 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 OCA2Q04671 838 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 TRIM32Q13049 653 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 MTA1Q13330 715 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 GTF2H2Q13888 395 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 CTF1Q16619 201 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 RFTN2Q52LD8 501 aaPredicted RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 ZC3H12BQ5HYM0 836 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 C10orf120Q5SQS8 335 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 GTF2H2CQ6P1K8 395 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 RNF165Q6ZSG1 346 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 CARNMT1Q8N4J0 409 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 TMCO5AQ8N6Q1 288 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 GTF2H4Q92759 462 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 FBXO32Q969P5 355 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 ALPK1Q96QP1 1244 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 ZBTB18Q99592 522 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 ZBED2Q9BTP6 218 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 CINPQ9BW66 212 aaPredicted RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 TRNAU1APQ9NX07 287 aaKnown RBP16.35■□□□□ 0.21
CTSB-228ENST00000533455 C3orf18Q9UK00 162 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 PCDHB5Q9Y5E4 795 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 PCDHGB1Q9Y5G3 927 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 CPQQ9Y646 472 aa16.35■□□□□ 0.21
CTSB-228ENST00000533455 LOC100130705A0A1B0GUX0 176 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 ELOVL7A1L3X0 281 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 SLC16A6O15403 523 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 ESR1P03372 595 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 RETP07949 1114 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 CCDC159P0C7I6 412 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 AGXTP21549 392 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 AKT1P31749 480 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 RYKP34925 604 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 TRAF3Q13114 568 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 CYP2A13Q16696 494 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 RFX4Q33E94 735 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 NCCRP1Q6ZVX7 275 aaPredicted RBP16.34■□□□□ 0.21
CTSB-228ENST00000533455 ADHFE1Q8IWW8 467 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 HS3ST5Q8IZT8 346 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 PIK3C3Q8NEB9 887 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 OR10A6Q8NH74 314 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 NUDT8Q8WV74 236 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 RHBDF1Q96CC6 855 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 VMP1Q96GC9 406 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 NODALQ96S42 347 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 ARMC7Q9H6L4 198 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 HMG20AQ9NP66 347 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 TLR8Q9NR97 1041 aaKnown RBP16.34■□□□□ 0.21
CTSB-228ENST00000533455 GIN1Q9NXP7 522 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 UBA2Q9UBT2 640 aaPredicted RBP16.34■□□□□ 0.21
CTSB-228ENST00000533455 ACTL7AQ9Y615 435 aa16.34■□□□□ 0.21
CTSB-228ENST00000533455 A0A0D9SEW6 157 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 ZNF99A8MXY4 864 aaPredicted RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 H7C0S8 307 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 CXCR6O00574 342 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 NDUFS2O75306 463 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 GABARAPO95166 117 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 OTCP00480 354 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 IGHA2P01877 340 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 IL1RNP18510 177 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 DCTP40126 519 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 CLCN7P51798 805 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 ABRAXAS2Q15018 415 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 ACOX1Q15067 660 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 AAK1Q2M2I8 961 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 TRIM16LQ309B1 348 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 SPESP1Q6UW49 350 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 FRA10AC1Q70Z53 315 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 GPR149Q86SP6 731 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 ADAMTSL2Q86TH1 951 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 ZNF598Q86UK7 904 aaKnown RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 MSRB3Q8IXL7 192 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 EID3Q8N140 333 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 ZCCHC7Q8N3Z6 543 aaKnown RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 MINDY2Q8NBR6 621 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 GLB1L3Q8NCI6 653 aaPredicted RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 POP5Q969H6 163 aaKnown RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 FAM162AQ96A26 154 aa16.33■□□□□ 0.21
CTSB-228ENST00000533455 ZNF641Q96N77 438 aaPredicted RBP16.33■□□□□ 0.21
CTSB-228ENST00000533455 SH3GL1Q99961 368 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms