RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZNF548Q8NEK5 533 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 IPMKQ8NFU5 416 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 OR56A4Q8NGH8 313 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC35B2Q8TB61 432 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CCDC110Q8TBZ0 833 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 LMX1AQ8TE12 382 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 RNF141Q8WVD5 230 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SCAMP4Q969E2 229 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 FUBP1Q96AE4 644 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 LRRC45Q96CN5 670 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 AP2M1Q96CW1 435 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 OXNAD1Q96HP4 312 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 PDLIM2Q96JY6 352 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CNDP2Q96KP4 475 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 WDR92Q96MX6 357 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SPATA13Q96N96 652 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 PPP1R2P1Q96PQ5 205 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 FAM167BQ9BTA0 163 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TMEM121Q9BTD3 319 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 RIOK2Q9BVS4 552 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TLR10Q9BXR5 811 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TEX101Q9BY14 249 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 FRMD8P1Q9BZ68 369 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GPR63Q9BZJ6 419 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ABCG8Q9H221 673 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GBA3Q9H227 469 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CARD9Q9H257 536 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 FAM83DQ9H4H8 585 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 USP29Q9HBJ7 922 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 MAGEE1Q9HCI5 957 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 PHPT1Q9NRX4 125 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 UCKL1Q9NWZ5 548 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GFOD1Q9NXC2 390 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 PKD2L2Q9NZM6 624 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 LRFN1Q9P244 771 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SPASTQ9UBP0 616 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 KLQ9UEF7 1012 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 APOBEC3BQ9UH17 382 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CD84Q9UIB8 345 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 TUBD1Q9UJT1 453 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 GPR34Q9UPC5 381 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 SHOC2Q9UQ13 582 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 R3HDM2Q9Y2K5 976 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 AAR2Q9Y312 384 aaKnown RBP5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 ZNF711Q9Y462 761 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CEP192Q8TEP8 1941 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CFAP54Q96N23 3096 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 PLXNA2O75051 1894 aa5.73□□□□□ -1.49
HMGB1P42-201ENST00000532126 CEP250Q9BV73 2442 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 RGSL1A5PLK6 1076 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 C5orf60A6NFR6 353 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 AURKAO14965 403 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 SCAMP1O15126 338 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 PHGDHO43175 533 aaKnown RBP5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 AQP9O43315 295 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 SIGLEC6O43699 453 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 LIASO43766 372 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 KIF5CO60282 957 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 CEP104O60308 925 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 GCATO75600 419 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 TRIM16O95361 564 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 AGTP01019 485 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 TNFP01375 233 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 FGGP02679 453 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 FGF1P05230 155 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 GSNP06396 782 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 ATXN1LP0C7T5 689 aaKnown RBP5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 FTH1P19P0C7X4 201 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 CTSEP14091 401 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 CKMT2P17540 419 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 HLA-DPA1P20036 260 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 MSNP26038 577 aaKnown RBP5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 PSMB4P28070 264 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 TPP2P29144 1249 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 STIP1P31948 543 aaKnown RBP5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 CXCR5P32302 372 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 NTF4P34130 210 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 CHRNA4P43681 627 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 SPINT3P49223 89 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 SEPHS1P49903 392 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 HK3P52790 923 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 CDK3Q00526 305 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 C1orf61Q13536 156 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 DAG1Q14118 895 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC1A5Q15758 541 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 PFKFB4Q16877 469 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 PARP6Q2NL67 630 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 PRRT3Q5FWE3 981 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 SIRPB2Q5JXA9 342 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 ALS2CLQ60I27 953 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 TMC3Q7Z5M5 1100 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 LMNTD2Q8IXW0 634 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 PELI3Q8N2H9 469 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 FSTL5Q8N475 847 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC25A41Q8N5S1 370 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 PNPLA1Q8N8W4 532 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 OR4C6Q8NH72 309 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 MAIP1Q8WWC4 291 aa5.72□□□□□ -1.49
HMGB1P42-201ENST00000532126 C1orf54Q8WWF1 131 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms