RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 GPATCH11Q8N954 259 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 ANKRD7Q92527 254 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 INPP5DQ92835 1189 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 ELMO2Q96JJ3 720 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 DPEP2Q9H4A9 486 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 SYTL2Q9HCH5 934 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 GULP1Q9UBP9 304 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 LGALS13Q9UHV8 139 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 MOSPD1Q9UJG1 213 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 PCDHGB2Q9Y5G2 931 aa12.27□□□□□ -0.45
COPB1-208ENST00000532088 PCYT1BQ9Y5K3 369 aaPredicted RBP12.27□□□□□ -0.45
COPB1-208ENST00000532088 BPTFQ12830 3046 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 CCDC189A1A4V9 331 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 HMX2A2RU54 273 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 NEMP2A6NFY4 417 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 PATE3B3GLJ2 98 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 CDK2AP1O14519 115 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 TPP1O14773 563 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 AQP9O43315 295 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 PCDHGA12O60330 932 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 MAN1A2O60476 641 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 NIPSNAP2O75323 286 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 SLCO2B1O94956 709 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 TRIM16O95361 564 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 WISP3O95389 354 aaPredicted RBP12.26□□□□□ -0.45
COPB1-208ENST00000532088 ACP5P13686 325 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 CTSEP14091 401 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 SLC2A4P14672 509 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 STMN1P16949 149 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 ENGP17813 658 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 EPHA8P29322 1005 aaPredicted RBP12.26□□□□□ -0.45
COPB1-208ENST00000532088 CCR7P32248 378 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 MAGEA12P43365 314 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 SERPINB8P50452 374 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 CCT8P50990 548 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 SLC12A2P55011 1212 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 TAS2R39P59534 338 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 RAB10P61026 200 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 IRX4P78413 519 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 TIAL1Q01085 375 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■■□ 21.9
COPB1-208ENST00000532088 CTBSQ01459 385 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 USP10Q14694 798 aaKnown RBP12.26□□□□□ -0.45
COPB1-208ENST00000532088 SHBQ15464 509 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 KCTD16Q68DU8 428 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 DCLK2Q8N568 766 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 ZBTB2Q8N680 514 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 LKAAEAR1Q8TD35 194 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 CD200R1Q8TD46 325 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 ELMO1Q92556 727 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 TMEM159Q96B96 161 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 PDLIM5Q96HC4 596 aaKnown RBP12.26□□□□□ -0.45
COPB1-208ENST00000532088 ZIM3Q96PE6 472 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 NDNQ99608 321 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 TMEM168Q9H0V1 697 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 GAREM1Q9H706 876 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 COG4Q9H9E3 785 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 NCDNQ9UBB6 729 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 SLC23A2Q9UGH3 650 aa12.26□□□□□ -0.45
COPB1-208ENST00000532088 TRMT6Q9UJA5 497 aaKnown RBP12.26□□□□□ -0.45
COPB1-208ENST00000532088 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
COPB1-208ENST00000532088 TP53BP1Q12888 1972 aaPredicted RBP12.25□□□□□ -0.45
COPB1-208ENST00000532088 GON4LQ3T8J9 2241 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 USP34Q70CQ2 3546 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 OR5K4A6NMS3 321 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 IQCF5A8MTL0 148 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 LMO7DNF2Z398 122 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 DYNC1I1O14576 645 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 SCAMP1O15126 338 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 F7P08709 466 aaPredicted RBP12.25□□□□□ -0.45
COPB1-208ENST00000532088 IDSP22304 550 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 DGKAP23743 735 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 RGS4P49798 205 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 CDKN2DP55273 166 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 FOXK2Q01167 660 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 ZNF844Q08AG5 666 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.25□□□□□ -0.45
COPB1-208ENST00000532088 SYTL3Q4VX76 610 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 PRRT3Q5FWE3 981 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 MROH9Q5TGP6 573 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 TMEM164Q5U3C3 297 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 ABRAXAS1Q6UWZ7 409 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 XKR5Q6UX68 686 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 KANSL1Q7Z3B3 1105 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 RD3Q7Z3Z2 195 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 LCA5Q86VQ0 697 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 NRROSQ86YC3 692 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 SLC22A15Q8IZD6 547 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 KRT222Q8N1A0 295 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
COPB1-208ENST00000532088 AVL9Q8NBF6 648 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 ZNF548Q8NEK5 533 aaPredicted RBP12.25□□□□□ -0.45
COPB1-208ENST00000532088 OR2W6PQ8NHA6 318 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 ACMSDQ8TDX5 336 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 EPS8L3Q8TE67 593 aaKnown RBP12.25□□□□□ -0.45
COPB1-208ENST00000532088 MZB1Q8WU39 189 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 ATXN7L3BQ96GX2 97 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 CABS1Q96KC9 395 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 GPR21Q99679 349 aa12.25□□□□□ -0.45
COPB1-208ENST00000532088 OLFM1Q99784 485 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms