RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SAE1Q9UBE0 346 aaPredicted RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 TCFL5Q9UL49 500 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 SNX7Q9UNH6 387 aa16.87■□□□□ 0.29
PKP3-208ENST00000531857 DNMT3AQ9Y6K1 912 aaPredicted RBP16.87■□□□□ 0.29
PKP3-208ENST00000531857 GLYATL1P3A0A0U1RQE8 302 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 F5H423 210 aaPredicted RBP16.86■□□□□ 0.29
PKP3-208ENST00000531857 KRT86O43790 486 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 DPM1O60762 260 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 CAPN1P07384 714 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 RAB40ALP0C0E4 278 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 RORAP35398 523 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 PTPRCAPQ14761 206 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 PRKD1Q15139 912 aaPredicted RBP16.86■□□□□ 0.29
PKP3-208ENST00000531857 SPA17Q15506 151 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 TMTC4Q5T4D3 741 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 RFX6Q8HWS3 928 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 RHOT1Q8IXI2 618 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 RNF25Q96BH1 459 aaPredicted RBP16.86■□□□□ 0.29
PKP3-208ENST00000531857 NLNQ9BYT8 704 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 TRABDQ9H4I3 376 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 KIR3DX1Q9H7L2 352 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 LATS2Q9NRM7 1088 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 FAM8A1Q9UBU6 413 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 FAM153AQ9UHL3 310 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 BTRCQ9Y297 605 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 PCDHGB7Q9Y5F8 929 aa16.86■□□□□ 0.29
PKP3-208ENST00000531857 MDC1Q14676 2089 aaKnown RBP16.85■□□□□ 0.29
PKP3-208ENST00000531857 DOPEY1Q5JWR5 2465 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 SLC9B1P1A6NJY1 282 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 USP27XA6NNY8 438 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 CLDN1O95832 211 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 KRT1P04264 644 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 POLR2CP19387 275 aaPredicted RBP16.85■□□□□ 0.29
PKP3-208ENST00000531857 NFKB1P19838 968 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 WASHC5Q12768 1159 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 RAPSNQ13702 412 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 ZDHHC20Q5W0Z9 365 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 ARMC6Q6NXE6 501 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 FAM198BQ6UWH4 519 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 GLT6D1Q7Z4J2 308 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 VSIG1Q86XK7 387 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 ZBTB2Q8N680 514 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 OR1L3Q8NH93 324 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 BLOC1S5Q8TDH9 187 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 CPT1BQ92523 772 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 PNPLA2Q96AD5 504 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 CLIP3Q96DZ5 547 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 TCTN2Q96GX1 697 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 MRGPRX2Q96LB1 330 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 CCDC42Q96M95 316 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 LCMT1Q9UIC8 334 aa16.85■□□□□ 0.29
PKP3-208ENST00000531857 LRBAP50851 2863 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 MGAT4DA6NG13 374 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 DDAH2O95865 285 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 ZFXP17010 805 aaPredicted RBP16.84■□□□□ 0.29
PKP3-208ENST00000531857 AKT1P31749 480 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 VAV2P52735 878 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 ITGA9Q13797 1035 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 SLC18A3Q16572 532 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 ZNF789Q5FWF6 425 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 RAD9BQ6WBX8 426 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 CARFQ8N187 725 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 LILRA3Q8N6C8 439 aaPredicted RBP16.84■□□□□ 0.29
PKP3-208ENST00000531857 GLIS1Q8NBF1 620 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 OR4E2Q8NGC2 313 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 OR2L2Q8NH16 312 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 SLC35G2Q8TBE7 412 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 ZFPM2Q8WW38 1151 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 OXNAD1Q96HP4 312 aaPredicted RBP16.84■□□□□ 0.29
PKP3-208ENST00000531857 RMDN2Q96LZ7 410 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 NRTNQ99748 197 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 PCMTD2Q9NV79 361 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 SMOXQ9NWM0 555 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
PKP3-208ENST00000531857 ERRFI1Q9UJM3 462 aaPredicted RBP16.84■□□□□ 0.29
PKP3-208ENST00000531857 POMT2Q9UKY4 750 aa16.84■□□□□ 0.29
PKP3-208ENST00000531857 UQCRHLA0A096LP55 91 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 WIPF3A6NGB9 483 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 TMEM150CB9EJG8 249 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 EPOP01588 193 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 POLBP06746 335 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 UQCRHP07919 91 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 TMEM253P0C7T8 217 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 PECAM1P16284 738 aaPredicted RBP16.83■□□□□ 0.28
PKP3-208ENST00000531857 HLA-DPA1P20036 260 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 MSH3P20585 1137 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 CDH3P22223 829 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 CASQ1P31415 396 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 ATP1A4Q13733 1029 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 NR6A1Q15406 480 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 SLC1A5Q15758 541 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 LONRF2Q1L5Z9 754 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 ASTE1Q2TB18 679 aaPredicted RBP16.83■□□□□ 0.28
PKP3-208ENST00000531857 PTCHD3Q3KNS1 767 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 PLEKHN1Q494U1 663 aaPredicted RBP16.83■□□□□ 0.28
PKP3-208ENST00000531857 NUP210LQ5VU65 1888 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 ANKRD12Q6UB98 2062 aa16.83■□□□□ 0.28
PKP3-208ENST00000531857 MFSD7Q6UXD7 560 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms