RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 RNASEH2BQ5TBB1 312 aaKnown RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 KIAA0930Q6ICG6 404 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 DUS1LQ6P1R4 473 aaKnown RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 PDZD3Q86UT5 571 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 HOOK3Q86VS8 718 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 NAT8LQ8N9F0 302 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 JPH3Q8WXH2 748 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 STAMBPL1Q96FJ0 436 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 NAF1Q96HR8 494 aaKnown RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 KRT12Q99456 494 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 ASCL3Q9NQ33 180 aa13.07□□□□□ -0.32
CAPN1-215ENST00000528396 MARCH4Q9P2E8 410 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-215ENST00000528396 EFCAB7A8K855 629 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 NDC80O14777 642 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 TTI1O43156 1089 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 TLX3O43711 291 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 KDM1AO60341 852 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 ITIH1P19827 911 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 EIF2S3P41091 472 aaKnown RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 PTGIRP43119 386 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 ARL4DP49703 201 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 CFHR1Q03591 330 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 HSPA14Q0VDF9 509 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 PRKAA1Q13131 559 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 ANKRD20A4Q4UJ75 823 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 BROXQ5VW32 411 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 CAPRIN2Q6IMN6 1127 aaKnown RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 NEPROQ6NW34 567 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 OOSP2Q86WS3 158 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 PDIK1LQ8N165 341 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 SKA2Q8WVK7 121 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 KCNE4Q8WWG9 221 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 ASZ1Q8WWH4 475 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 LCN9Q8WX39 176 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 RSC1A1Q92681 617 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 TFGQ92734 400 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 C16orf45Q96MC5 204 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 PANX3Q96QZ0 392 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 TCF12Q99081 682 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 TRIM31Q9BZY9 425 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 OR52A5Q9H2C5 316 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 KIR3DX1Q9H7L2 352 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 MVB12BQ9H7P6 319 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 C20orf96Q9NUD7 363 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-215ENST00000528396 SLC39A1Q9NY26 324 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 SLC24A2Q9UI40 661 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 PCDHGA7Q9Y5G6 932 aa13.06□□□□□ -0.32
CAPN1-215ENST00000528396 ATRXP46100 2492 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 H3BMM5 538 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 SMAPO00193 183 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 KPNA5O15131 536 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 CCL4P13236 92 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 PGAM1P18669 254 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 PDHA2P29803 388 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 SLC5A2P31639 672 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 ABCG1P45844 678 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 GFERP55789 205 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 RAB15P59190 212 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 LONRF1Q17RB8 773 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 BBS9Q3SYG4 887 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 DNTTIP2Q5QJE6 756 aaKnown RBP13.05□□□□□ -0.32
CAPN1-215ENST00000528396 CACHD1Q5VU97 1274 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 ZNF470Q6ECI4 717 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 FAM92BQ6ZTR7 304 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 MAATS1Q7Z4T9 603 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 CLEC14AQ86T13 490 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
CAPN1-215ENST00000528396 ACVR1CQ8NER5 493 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 CALML6Q8TD86 181 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 HNRNPLLQ8WVV9 542 aaKnown RBP13.05□□□□□ -0.32
CAPN1-215ENST00000528396 USP7Q93009 1102 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 SNF8Q96H20 258 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 C9orf72Q96LT7 481 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 TAAR9Q96RI9 348 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 TRIM51Q9BSJ1 452 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 NAT9Q9BTE0 207 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 HGH1Q9BTY7 390 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 ASPSCR1Q9BZE9 553 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 CCDC68Q9H2F9 335 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 TRIT1Q9H3H1 467 aaKnown RBP13.05□□□□□ -0.32
CAPN1-215ENST00000528396 SRMSQ9H3Y6 488 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 HRASLS2Q9NWW9 162 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 OGFRQ9NZT2 677 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 PDP2Q9P2J9 529 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 ASF1AQ9Y294 204 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 PCDHB11Q9Y5F2 797 aa13.05□□□□□ -0.32
CAPN1-215ENST00000528396 COL27A1Q8IZC6 1860 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-215ENST00000528396 MN1Q10571 1320 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-215ENST00000528396 PIKFYVEQ9Y2I7 2098 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 A0A087WV48 116 aa13.04□□□□□ -0.32
CAPN1-215ENST00000528396 OR6C74A6NCV1 312 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms