RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 STAMBPL1Q96FJ0 436 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 CDKN2AIPNLQ96HQ2 116 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 DNAJC1Q96KC8 554 aaKnown RBP13.07□□□□□ -0.32
CAPN1-207ENST00000527189 DESI2Q9BSY9 194 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 RARRES3Q9UL19 164 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 PADI1Q9ULC6 663 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 R3HDM2Q9Y2K5 976 aaKnown RBP13.07□□□□□ -0.32
CAPN1-207ENST00000527189 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
CAPN1-207ENST00000527189 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-207ENST00000527189 CFAP20Q9Y6A4 193 aaKnown RBP13.07□□□□□ -0.32
CAPN1-207ENST00000527189 UTP20O75691 2785 aaKnown RBP13.06□□□□□ -0.32
CAPN1-207ENST00000527189 UBA6A0AVT1 1052 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-207ENST00000527189 MROH6A6NGR9 719 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 IFRD1O00458 451 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-207ENST00000527189 NKX2-8O15522 239 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 KIAA0754O94854 1291 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 AP2A2O94973 939 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 ZBTB11O95625 1053 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-207ENST00000527189 GAS8O95995 478 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 POLBP06746 335 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 ZNF28P17035 718 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 TCN2P20062 427 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 ARL4DP49703 201 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 GDF10P55107 478 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 POLE2P56282 527 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 GSDMDP57764 484 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 CDC20Q12834 499 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 PRKAA1Q13131 559 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 ZRANB3Q5FWF4 1079 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 SERPINA9Q86WD7 417 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 UNC5BQ8IZJ1 945 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 D2HGDHQ8N465 521 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 SPC24Q8NBT2 197 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 ACVR1CQ8NER5 493 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-207ENST00000527189 STARD8Q92502 1023 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 MAP3K3Q99759 626 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 FAM96AQ9H5X1 160 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 IL17BQ9UHF5 180 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 CAPN6Q9Y6Q1 641 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 LRRK2Q5S007 2527 aa13.06□□□□□ -0.32
CAPN1-207ENST00000527189 ANKRD17O75179 2603 aaKnown RBP13.06□□□□□ -0.32
CAPN1-207ENST00000527189 A0A0U1RQJ8 604 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TCRBV7S2A1N4TA0A589 114 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 OR6C74A6NCV1 312 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 C21orf140B9A014 251 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 SUV39H1O43463 412 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 LIASO43766 372 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 SLC28A2O43868 658 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 SUN1O94901 812 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 FOLR1P15328 257 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TPH1P17752 444 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 DLSTP36957 453 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 FDFT1P37268 417 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 NSG1P42857 185 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TUBB4BP68371 445 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 CDH17Q12864 832 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 KCNAB2Q13303 367 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TUBB3Q13509 450 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TUBB2AQ13885 445 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 ITIH4Q14624 930 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 POU6F1Q14863 301 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 OASLQ15646 514 aaKnown RBP13.05□□□□□ -0.32
CAPN1-207ENST00000527189 ZNF658BQ4V348 819 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TMTC4Q5T4D3 741 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 SEL1L2Q5TEA6 688 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 LYPLAL1Q5VWZ2 237 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TAS2R42Q7RTR8 314 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 GALNT6Q8NCL4 622 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 APOBEC4Q8WW27 367 aaKnown RBP13.05□□□□□ -0.32
CAPN1-207ENST00000527189 SEC14L1Q92503 715 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 RMDN2Q96LZ7 410 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TTC1Q99614 292 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TUBB2BQ9BVA1 445 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 OR52A5Q9H2C5 316 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 TFB2MQ9H5Q4 396 aaKnown RBP13.05□□□□□ -0.32
CAPN1-207ENST00000527189 MVB12BQ9H7P6 319 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 COG4Q9H9E3 785 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 SYTL2Q9HCH5 934 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 C1GALT1Q9NS00 363 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 FGF21Q9NSA1 209 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 RIMKLBQ9ULI2 386 aa13.05□□□□□ -0.32
CAPN1-207ENST00000527189 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 F8W8V4 182 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 TERTO14746 1132 aaKnown RBP13.04□□□□□ -0.32
CAPN1-207ENST00000527189 CDKN1CP49918 316 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-207ENST00000527189 PPP1CAP62136 330 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 PLOD1Q02809 727 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-207ENST00000527189 KCNC4Q03721 635 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 SEPT6Q14141 434 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 PWWP2BQ6NUJ5 590 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 ATG14Q6ZNE5 492 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 SLC13A5Q86YT5 568 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-207ENST00000527189 LILRA3Q8N6C8 439 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-207ENST00000527189 DNAAF3Q8N9W5 541 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 OR4E2Q8NGC2 313 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 LCN9Q8WX39 176 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 PEX13Q92968 403 aa13.04□□□□□ -0.32
CAPN1-207ENST00000527189 SGSM3Q96HU1 749 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms