RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 IFRD1O00458 451 aaPredicted RBP20.29■□□□□ 0.84
CD44-222ENST00000526025 RFPL3O75679 317 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 FAM153BP0C7A2 387 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 MTHFD1P11586 935 aaKnown RBP20.29■□□□□ 0.84
CD44-222ENST00000526025 ITGB6P18564 788 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 NDUFS1P28331 727 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 SLC19A1P41440 591 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 SKIV2L2P42285 1042 aaKnown RBP20.29■□□□□ 0.84
CD44-222ENST00000526025 ID4P47928 161 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 PMS2P54278 862 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 VSNL1P62760 191 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 E2F1Q01094 437 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 HHEXQ03014 270 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 DNAJC3Q13217 504 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 ERCC6LQ2NKX8 1250 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 TTLL9Q3SXZ7 439 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 FAM153CQ494X1 144 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 FAM45BPQ6NSW5 357 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 EFL1Q7Z2Z2 1120 aaKnown RBP20.29■□□□□ 0.84
CD44-222ENST00000526025 ZBTB2Q8N680 514 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 WDR48Q8TAF3 677 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 IFI44Q8TCB0 444 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 FAM45AQ8TCE6 357 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.29■□□□□ 0.84
CD44-222ENST00000526025 TAS2R13Q9NYV9 303 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 TXNDC16Q9P2K2 825 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 LRIT1Q9P2V4 623 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 FAM8A1Q9UBU6 413 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 DHRS7Q9Y394 339 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 RNF215Q9Y6U7 377 aa20.29■□□□□ 0.84
CD44-222ENST00000526025 A0A087WUV0 522 aaPredicted RBP20.28■□□□□ 0.84
CD44-222ENST00000526025 DCDC2BA2VCK2 349 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 RHPN2P1A8MT19 583 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 ACSL3O95573 720 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 VIPP01282 170 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 F7P08709 466 aaPredicted RBP20.28■□□□□ 0.84
CD44-222ENST00000526025 FTH1P19P0C7X4 201 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 ACADLP28330 430 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 PDHA2P29803 388 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 PREPP48147 710 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 SIM1P81133 766 aaPredicted RBP20.28■□□□□ 0.84
CD44-222ENST00000526025 HSPA14Q0VDF9 509 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 BIRC2Q13490 618 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 GRTP1Q5TC63 336 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 NEK10Q6ZWH5 1172 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 TRIM48Q8IWZ4 208 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 CTAGE3PQ8IX95 158 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 INPP5DQ92835 1189 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 CCDC74AQ96AQ1 378 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 CXorf40BQ96DE9 158 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 VPS39Q96JC1 886 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 C12orf66Q96MD2 445 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 INSM2Q96T92 566 aaPredicted RBP20.28■□□□□ 0.84
CD44-222ENST00000526025 RBBP8Q99708 897 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 SLC40A1Q9NP59 571 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 RAB21Q9UL25 225 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 PSMD13Q9UNM6 376 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 COLEC10Q9Y6Z7 277 aa20.28■□□□□ 0.84
CD44-222ENST00000526025 SPAARA0A1B0GVQ0 90 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 CPED1A4D0V7 1026 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 LILRA5A6NI73 299 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 OR52A4PA6NMU1 304 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 PPM1DO15297 605 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 CBSLP0DN79 551 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 MYF5P13349 255 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 ENO3P13929 434 aaPredicted RBP20.27■□□□□ 0.84
CD44-222ENST00000526025 FDXRP22570 491 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 CBSP35520 551 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 EPHA4P54764 986 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 CLPPQ16740 277 aaPredicted RBP20.27■□□□□ 0.84
CD44-222ENST00000526025 KLHL38Q2WGJ6 581 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 RBM20Q5T481 1227 aaKnown RBP20.27■□□□□ 0.84
CD44-222ENST00000526025 LRRC8EQ6NSJ5 796 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 GSPT2Q8IYD1 628 aaKnown RBP20.27■□□□□ 0.84
CD44-222ENST00000526025 CNPY4Q8N129 248 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 PPM1NQ8N819 430 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 SPDYE1Q8NFV5 336 aaPredicted RBP20.27■□□□□ 0.84
CD44-222ENST00000526025 CD200R1Q8TD46 325 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 EPB41L1Q9H4G0 881 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 MVB12BQ9H7P6 319 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 VWA7Q9Y334 891 aa20.27■□□□□ 0.84
CD44-222ENST00000526025 GIPC1O14908 333 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 RIPK2O43353 540 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 SPRP35270 261 aaPredicted RBP20.26■□□□□ 0.83
CD44-222ENST00000526025 MAPK9P45984 424 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 LIMK2P53671 638 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 TIAL1Q01085 375 aaKnown RBP eCLIP20.26■□□□□ 0.83
CD44-222ENST00000526025 PERM1Q5SV97 790 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 HECTD2Q5U5R9 776 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 EMBQ6PCB8 327 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 UNC5DQ6UXZ4 953 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 TMEM26Q6ZUK4 368 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 SPRED1Q7Z699 444 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 GPATCH11Q8N954 259 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 GIMAP7Q8NHV1 300 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 TFGQ92734 400 aaPredicted RBP20.26■□□□□ 0.83
CD44-222ENST00000526025 NDNQ99608 321 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 GPR21Q99679 349 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 GPR22Q99680 433 aa20.26■□□□□ 0.83
CD44-222ENST00000526025 POPDC3Q9HBV1 291 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms