RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 LIN7AO14910 233 aaPredicted RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 AOAHP28039 575 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 CSE1LP55060 971 aaKnown RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 MPP1Q00013 466 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 GUCY2DQ02846 1103 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 RPA4Q13156 261 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 PTRHD1Q6GMV3 140 aaKnown RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 TRMT10BQ6PF06 316 aaKnown RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 ZNF574Q6ZN55 896 aaPredicted RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 ZBED8Q8IZ13 594 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 CALML6Q8TD86 181 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 JPH3Q8WXH2 748 aaPredicted RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 CNTNAP3BQ96NU0 1288 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 CNTNAP3Q9BZ76 1288 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 EPB41L5Q9HCM4 733 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 SAYSD1Q9NPB0 183 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 INTS10Q9NVR2 710 aaKnown RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 OGFRQ9NZT2 677 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 TMEM9Q9P0T7 183 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 SLC17A6Q9P2U8 582 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 FBXO5Q9UKT4 447 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 ENTPD2Q9Y5L3 495 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 ANKRD11Q6UB99 2663 aaPredicted RBP12.03□□□□□ -0.48
CTTN-210ENST00000525852 ZZEF1O43149 2961 aa12.03□□□□□ -0.48
CTTN-210ENST00000525852 LILRA5A6NI73 299 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 F8W8V4 182 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 PFDN6O15212 129 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 ZW10O43264 779 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 NIPSNAP2O75323 286 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 HAUS5O94927 633 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 CPNE6O95741 557 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 ESR1P03372 595 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 MPSTP25325 297 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 MAPK9P45984 424 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 EPHA4P54764 986 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 ADARP55265 1226 aaKnown RBP12.02□□□□□ -0.48
CTTN-210ENST00000525852 GPLD1P80108 840 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 CAV1Q03135 178 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 SQSTM1Q13501 440 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 MAP9Q49MG5 647 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 SYTL3Q4VX76 610 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 ZNF549Q6P9A3 640 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 UNQ6494/PRO21346Q6UXR6 183 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 PDZD3Q86UT5 571 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 VRK3Q8IV63 474 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 SLITRK4Q8IW52 837 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 CNTN4Q8IWV2 1026 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 RBM12BQ8IXT5 1001 aaKnown RBP12.02□□□□□ -0.48
CTTN-210ENST00000525852 LMNTD2Q8IXW0 634 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 CEP112Q8N8E3 955 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 C2CD4AQ8NCU7 369 aaPredicted RBP12.02□□□□□ -0.48
CTTN-210ENST00000525852 PHC3Q8NDX5 983 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 OR10G6Q8NH81 332 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 FAM136AQ96C01 138 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 CERS2Q96G23 380 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 FAM167BQ9BTA0 163 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.02□□□□□ -0.48
CTTN-210ENST00000525852 SEMA6CQ9H3T2 930 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 ZDHHC18Q9NUE0 388 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 GALPQ9UBC7 116 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 CDYLQ9Y232 598 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.48
CTTN-210ENST00000525852 IFRD1O00458 451 aaPredicted RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 EIF3HO15372 352 aaKnown RBP eCLIP12.02□□□□□ -0.49
CTTN-210ENST00000525852 GPC4O75487 556 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 UBXN7O94888 489 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 CAPNS1P04632 268 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 PKMP14618 531 aaKnown RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 ACADLP28330 430 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 GABRB3P28472 473 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 CD151P48509 253 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 CARSP49589 748 aaKnown RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 ZFP36L1Q07352 338 aaKnown RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 HSPA14Q0VDF9 509 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 FRG1Q14331 258 aaKnown RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 ZNF449Q6P9G9 518 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 CNSTQ6PJW8 725 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 CAPN12Q6ZSI9 719 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 PIM3Q86V86 326 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 SLC22A15Q8IZD6 547 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 LRRN4CLQ8ND94 238 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 MDM1Q8TC05 714 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 PYROXD1Q8WU10 500 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 TFGQ92734 400 aaPredicted RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 TMEM159Q96B96 161 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 AHCYL2Q96HN2 611 aaKnown RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 NRTNQ99748 197 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 TSSK1BQ9BXA7 367 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 PPANQ9NQ55 473 aaKnown RBP12.02□□□□□ -0.49
CTTN-210ENST00000525852 MED16Q9Y2X0 877 aa12.02□□□□□ -0.49
CTTN-210ENST00000525852 LAMA5O15230 3695 aa12.01□□□□□ -0.49
CTTN-210ENST00000525852 IGHV5-10-1A0A0J9YXX1 117 aa12.01□□□□□ -0.49
CTTN-210ENST00000525852 DUX1O43812 170 aa12.01□□□□□ -0.49
CTTN-210ENST00000525852 SLCO2B1O94956 709 aa12.01□□□□□ -0.49
CTTN-210ENST00000525852 MPOP05164 745 aa12.01□□□□□ -0.49
CTTN-210ENST00000525852 PROS1P07225 676 aa12.01□□□□□ -0.49
CTTN-210ENST00000525852 TYRP1P17643 537 aa12.01□□□□□ -0.49
CTTN-210ENST00000525852 ABCG1P45844 678 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms