RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TGIF1Q15583 401 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 ZNF658BQ4V348 819 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-228ENST00000525441 ARHGAP40Q5TG30 622 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 CYB5D1Q6P9G0 228 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
NR1H3-228ENST00000525441 FAM92BQ6ZTR7 304 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 DTX1Q86Y01 620 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 ACVR1CQ8NER5 493 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 COG1Q8WTW3 980 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 JPH3Q8WXH2 748 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-228ENST00000525441 ELMO1Q92556 727 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 UBXN4Q92575 508 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 CD180Q99467 661 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 TSSK1BQ9BXA7 367 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 MVB12BQ9H7P6 319 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
NR1H3-228ENST00000525441 CATSPERZQ9NTU4 200 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 HRASLS2Q9NWW9 162 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 PRSS21Q9Y6M0 314 aa17.09■□□□□ 0.33
NR1H3-228ENST00000525441 OR5K3A6NET4 321 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 K7ENP7 123 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 PHF2O75151 1096 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 TCP1P17987 556 aaKnown RBP17.08■□□□□ 0.32
NR1H3-228ENST00000525441 MGAT1P26572 445 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 PREPP48147 710 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 FNTAP49354 379 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 TTPAP49638 278 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 SEPHS1P49903 392 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 CRADDP78560 199 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 FOXM1Q08050 763 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 KCNJ11Q14654 390 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 SYTL3Q4VX76 610 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 INO80CQ6PI98 192 aaPredicted RBP17.08■□□□□ 0.32
NR1H3-228ENST00000525441 ZNF534Q76KX8 674 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 MPP5Q8N3R9 675 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 SNRNP27Q8WVK2 155 aaKnown RBP17.08■□□□□ 0.32
NR1H3-228ENST00000525441 KLHL6Q8WZ60 621 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 PMEPA1Q969W9 287 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 FERD3LQ96RJ6 166 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 KIFC1Q9BW19 673 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 TREX1Q9NSU2 369 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 SIDT1Q9NXL6 827 aaKnown RBP17.08■□□□□ 0.32
NR1H3-228ENST00000525441 BPTFQ12830 3046 aa17.08■□□□□ 0.32
NR1H3-228ENST00000525441 CD3EAPO15446 510 aaKnown RBP17.07■□□□□ 0.32
NR1H3-228ENST00000525441 KIF1CO43896 1103 aaKnown RBP17.07■□□□□ 0.32
NR1H3-228ENST00000525441 OR1I1O60431 355 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 PDHA2P29803 388 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 TERF1P54274 439 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 RHDQ02161 417 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 PRKAA1Q13131 559 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 DNTTIP2Q5QJE6 756 aaKnown RBP17.07■□□□□ 0.32
NR1H3-228ENST00000525441 KMT5CQ86Y97 462 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 LCN9Q8WX39 176 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 TFGQ92734 400 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-228ENST00000525441 CTRCQ99895 268 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 SYBUQ9NX95 663 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 SEMA5BQ9P283 1151 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 PIKFYVEQ9Y2I7 2098 aa17.07■□□□□ 0.32
NR1H3-228ENST00000525441 TCRBV7S3A2A0A539 114 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 UBA6A0AVT1 1052 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-228ENST00000525441 OR6C74A6NCV1 312 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 TLCD2A6NGC4 264 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 MATN2O00339 956 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 PFDN6O15212 129 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 MLNP12872 115 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 NELFEP18615 380 aaKnown RBP17.06■□□□□ 0.32
NR1H3-228ENST00000525441 NMBRP28336 390 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 ARL4DP49703 201 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 BOP1Q14137 746 aaKnown RBP17.06■□□□□ 0.32
NR1H3-228ENST00000525441 IL11RAQ14626 422 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 CARFQ8N187 725 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 OTUD6BQ8N6M0 293 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 IL22RA1Q8N6P7 574 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 ZSCAN1Q8NBB4 408 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 MCUQ8NE86 351 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 OR4E2Q8NGC2 313 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 CPT1BQ92523 772 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 TRIT1Q9H3H1 467 aaKnown RBP17.06■□□□□ 0.32
NR1H3-228ENST00000525441 SRMSQ9H3Y6 488 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 XAB2Q9HCS7 855 aaKnown RBP17.06■□□□□ 0.32
NR1H3-228ENST00000525441 SAMD15Q9P1V8 674 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 SOX13Q9UN79 622 aa17.06■□□□□ 0.32
NR1H3-228ENST00000525441 EIF4E1BA6NMX2 242 aaKnown RBP17.05■□□□□ 0.32
NR1H3-228ENST00000525441 PRMT5O14744 637 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-228ENST00000525441 RAD1O60671 282 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 NDUFS3O75489 264 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 PAMP19021 973 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 GNG11P61952 73 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 PPP1CAP62136 330 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 SEMA3AQ14563 771 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 MRNIPQ6NTE8 343 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 CASC4Q6P4E1 433 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 SDCCAG8Q86SQ7 713 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-228ENST00000525441 VASH2Q86V25 355 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 LRRC6Q86X45 466 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 CACNA2D3Q8IZS8 1091 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 SIDT2Q8NBJ9 832 aaKnown RBP17.05■□□□□ 0.32
NR1H3-228ENST00000525441 NKD1Q969G9 470 aa17.05■□□□□ 0.32
NR1H3-228ENST00000525441 SLC41A2Q96JW4 573 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms