RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 Q8N9G6 341 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 POC1BQ8TC44 478 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 ZNF483Q8TF39 744 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 DDI1Q8WTU0 396 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 THAP4Q8WY91 577 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 CCT6BQ92526 530 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 RTP4Q96DX8 246 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 TREX2Q9BQ50 279 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 SYT15Q9BQS2 421 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 MESP1Q9BRJ9 268 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 TWSG1Q9GZX9 223 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 COMMD8Q9NX08 183 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 IL37Q9NZH6 218 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 VSX1Q9NZR4 365 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 APOBEC3BQ9UH17 382 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 IPO11Q9UI26 975 aaKnown RBP6.93□□□□□ -1.3
NEDD8-203ENST00000524927 ST6GALNAC2Q9UJ37 374 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 CDH9Q9ULB4 789 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 SLC39A10Q9ULF5 831 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 B3GNT3Q9Y2A9 372 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 RPS6KL1Q9Y6S9 549 aa6.93□□□□□ -1.3
NEDD8-203ENST00000524927 EDDM13A0A1B0GTR0 161 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ARHGEF35A5YM69 484 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 CLCA1A8K7I4 914 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 MASP2O00187 686 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ZBTB43O43298 467 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ANP32CO43423 234 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 FAM189A1O60320 539 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 CREG1O75629 220 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 TBX18O95935 607 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 KLKB1P03952 638 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 IDEP14735 1019 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 TPH1P17752 444 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 POLR2EP19388 210 aaKnown RBP6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ITGALP20701 1170 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 DLSTP36957 453 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ALDH9A1P49189 494 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 TOB1P50616 345 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-203ENST00000524927 CCL11P51671 97 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 THOP1P52888 689 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ITGA8P53708 1063 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 PEX3P56589 373 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 CLDN2P57739 230 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 OCA2Q04671 838 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 C1orf61Q13536 156 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 CEBPEQ15744 281 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ASIC2Q16515 512 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 CLNKQ7Z7G1 428 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 GAS2L3Q86XJ1 694 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 SLC16A11Q8NCK7 471 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 MYCBPAPQ8TBZ2 947 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 PCED1BQ96HM7 432 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 NAP1L4Q99733 375 aaKnown RBP6.92□□□□□ -1.3
NEDD8-203ENST00000524927 LRRC61Q9BV99 259 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 TEX101Q9BY14 249 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 STK33Q9BYT3 514 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 SPRTNQ9H040 489 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ASB7Q9H672 318 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 HEYLQ9NQ87 328 aaPredicted RBP6.92□□□□□ -1.3
NEDD8-203ENST00000524927 SH3GLB2Q9NR46 395 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 ABCB8Q9NUT2 735 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 GDAP2Q9NXN4 497 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 CTTNBP2NLQ9P2B4 639 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 GGA2Q9UJY4 613 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 FER1L5A0AVI2 2057 aa6.92□□□□□ -1.3
NEDD8-203ENST00000524927 IGHV5-10-1A0A0J9YXX1 117 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 INAFM1C9JVW0 142 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 M0QYT0 321 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 HCRTO43612 131 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 SKAP2O75563 359 aaPredicted RBP6.91□□□□□ -1.3
NEDD8-203ENST00000524927 STK17BO94768 372 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 SUN1O94901 812 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 NDST3O95803 873 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 IL1BP01584 269 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 MATR3P43243 847 aaKnown RBP eCLIP6.91□□□□□ -1.3
NEDD8-203ENST00000524927 PPM1FP49593 454 aaPredicted RBP6.91□□□□□ -1.3
NEDD8-203ENST00000524927 VAMP7P51809 220 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 RCAN1P53805 252 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 LOXL3P58215 753 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 MC2RQ01718 297 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 EIF2B5Q13144 721 aaKnown RBP6.91□□□□□ -1.3
NEDD8-203ENST00000524927 BLMHQ13867 455 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 ELAVL3Q14576 367 aaKnown RBP6.91□□□□□ -1.3
NEDD8-203ENST00000524927 ZNF284Q2VY69 593 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 TUBB8Q3ZCM7 444 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 SPDYE7PQ495Y7 208 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 CACHD1Q5VU97 1274 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 PODNL1Q6PEZ8 512 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 TMEM108Q6UXF1 575 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 HORMAD1Q86X24 394 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 NRSN1Q8IZ57 195 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 RBFAQ8N0V3 343 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 FSTL5Q8N475 847 aaPredicted RBP6.91□□□□□ -1.3
NEDD8-203ENST00000524927 RNF31Q96EP0 1072 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 BMFQ96LC9 184 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 ELOVL4Q9GZR5 314 aa6.91□□□□□ -1.3
NEDD8-203ENST00000524927 CLPBQ9H078 707 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms