RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SPATS2LQ9NUQ6 558 aaKnown RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 TMEM161AQ9NX61 479 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 GDE1Q9NZC3 331 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 GRHPRQ9UBQ7 328 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 NDRG3Q9UGV2 375 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 TINAGQ9UJW2 476 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 ZNF215Q9UL58 517 aaPredicted RBP1.65□□□□□ -2.15
CD44-212ENST00000524922 DHDHQ9UQ10 334 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 NFE2L3Q9Y4A8 694 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 PSAT1Q9Y617 370 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MYH2Q9UKX2 1941 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 STAB1Q9NY15 2570 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 NF1P21359 2839 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 DENND4AQ7Z401 1863 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 FRMPD4Q14CM0 1322 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 PHLPP2Q6ZVD8 1323 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 IGSF9BQ9UPX0 1349 aa1.65□□□□□ -2.15
CD44-212ENST00000524922 MYH13Q9UKX3 1938 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 SPEF2Q9C093 1822 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 A0A1W2PS18 150 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 EIF4E1BA6NMX2 242 aaKnown RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 HSPB2A8KAH6 182 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 KRTAP16-1A8MUX0 517 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 J3QKU1 62 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 PLRG1O43660 514 aaKnown RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 SLC25A17O43808 307 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ZIC3O60481 467 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ECI2O75521 394 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 SKAP2O75563 359 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 NDUFB10O96000 172 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 PDGFBP01127 241 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 HNRNPA1P09651 372 aaKnown RBP eCLIP1.64□□□□□ -2.15
CD44-212ENST00000524922 SRCP12931 536 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 SCG2P13521 617 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 LIFRP42702 1097 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 NRIP1P48552 1158 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 MCM2P49736 904 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CSRP3P50461 194 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CLCN3P51790 818 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 UCNP55089 124 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ASIC1P78348 528 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 PHEXP78562 749 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 RELQ04864 619 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 KLRC3Q07444 240 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ARHGAP1Q07960 439 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 SLC20A2Q08357 652 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 HTR4Q13639 388 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 BTG3Q14201 252 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 NEDD9Q14511 834 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 WDR43Q15061 677 aaKnown RBP eCLIP1.64□□□□□ -2.15
CD44-212ENST00000524922 HSPB2Q16082 182 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 SLC18A3Q16572 532 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 LETM2Q2VYF4 491 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 TMEM30BQ3MIR4 351 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 TUBB8Q3ZCM7 444 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ESCO2Q56NI9 601 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 RUNDC3AQ59EK9 446 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 PPP6R3Q5H9R7 873 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 CCDC158Q5M9N0 1113 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CBWD5Q5RIA9 395 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 N4BP2L1Q5TBK1 243 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 C12orf60Q5U649 245 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ANO1Q5XXA6 986 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 PGBD2Q6P3X8 592 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 DCLRE1AQ6PJP8 1040 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 METTL7BQ6UX53 244 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ZNF852Q6ZMS4 543 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 SLC24A5Q71RS6 500 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 NFE4Q86UQ8 179 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ZC3HC1Q86WB0 502 aaKnown RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 TMEM219Q86XT9 240 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 RNF168Q8IYW5 571 aaPredicted RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 GALNT15Q8N3T1 639 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 MAB21L3Q8N8X9 362 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 LEMD2Q8NC56 503 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 OR6J1Q8NGC5 347 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 OR6Y1Q8NGX8 325 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 FAM76AQ8TAV0 307 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 LRRC8CQ8TDW0 803 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CSGALNACT1Q8TDX6 532 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 NCSTNQ92542 709 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ALG14Q96F25 216 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CDHR1Q96JP9 859 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 RPGRIP1Q96KN7 1286 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 C16orf70Q9BSU1 422 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 HAUS8Q9BT25 410 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CRB3Q9BUF7 120 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 TMEM117Q9H0C3 514 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 POMKQ9H5K3 350 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CLMPQ9H6B4 373 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 ESRP2Q9H6T0 727 aaKnown RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 ARFGAP3Q9NP61 516 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 LTB4R2Q9NPC1 389 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 CYSLTR2Q9NS75 346 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 TCP11L1Q9NUJ3 509 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 TMEM30AQ9NV96 361 aa1.64□□□□□ -2.15
CD44-212ENST00000524922 GEMIN8Q9NWZ8 242 aaKnown RBP1.64□□□□□ -2.15
CD44-212ENST00000524922 AATFQ9NY61 560 aaKnown RBP eCLIP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms