RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 NYNRINQ9P2P1 1898 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ZFHX2Q9C0A1 2572 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FSD2A1L4K1 749 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CXorf65A6NEN9 183 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 LGALS16A8MUM7 142 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 BECN2A8MW95 431 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 KPNA7A9QM74 516 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CYB561D2O14569 222 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PCDH17O14917 1159 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PMM2O15305 246 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 LINC01565O15544 149 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ATP2C2O75185 946 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 B3GAT3O94766 335 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 GNA14O95837 355 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 TNNC2P02585 160 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 LCATP04180 440 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CYP1A2P05177 515 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CNPP09543 421 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 WEE2P0C1S8 567 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 KRT13P13646 458 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PKMP14618 531 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ACAT1P24752 427 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 EEF1GP26641 437 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 GTF2H1P32780 548 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 RPL9P32969 192 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 STAT1P42224 750 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PIK3CAP42336 1068 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PCYT1AP49585 367 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 TAF6P49848 677 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 NOP14P78316 857 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 MYL7Q01449 175 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 GPS2Q13227 327 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 BIRC3Q13489 604 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 GPM6BQ13491 265 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 KCNC3Q14003 757 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 GPR18Q14330 331 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PTPN14Q15678 1187 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 RAB30Q15771 203 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 TPD52L1Q16890 204 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF699Q32M78 642 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ENTPD8Q5MY95 495 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 DNTTIP2Q5QJE6 756 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 SPOUT1Q5T280 376 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FAM171A1Q5VUB5 890 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PLPP4Q5VZY2 271 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 WSCD1Q658N2 575 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ERAP2Q6P179 960 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 TRIM65Q6PJ69 517 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 DCLRE1AQ6PJP8 1040 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FAM83HQ6ZRV2 1179 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 SLC16A12Q6ZSM3 486 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FAM43BQ6ZT52 329 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PAQR9Q6ZVX9 377 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 RRAGAQ7L523 313 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 MDGA2Q7Z553 956 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 TRABD2AQ86V40 505 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 NR2C2APQ86WQ0 139 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 HACE1Q8IYU2 909 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FAM185AQ8N0U4 392 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CADM3Q8N126 398 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 VPS52Q8N1B4 723 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PDCL2Q8N4E4 241 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 SLC25A41Q8N5S1 370 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 LRRC52Q8N7C0 313 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ZBTB8BQ8NAP8 495 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 STKLD1Q8NE28 680 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FBXL13Q8NEE6 735 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 OR10T2Q8NGX3 314 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 DNASE2BQ8WZ79 361 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 NR4A3Q92570 626 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ZNF419Q96HQ0 510 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 HPDLQ96IR7 371 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ADAD1Q96M93 576 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ERGIC2Q96RQ1 377 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 WDR77Q9BQA1 342 aaPredicted RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CLSTN3Q9BQT9 956 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 XPO4Q9C0E2 1151 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ELOVL4Q9GZR5 314 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 INTS2Q9H0H0 1204 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 MAGEH1Q9H213 219 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 MTIF3Q9H2K0 278 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 SLC28A3Q9HAS3 691 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 METTL14Q9HCE5 456 aaKnown RBP3.05□□□□□ -1.92
CSDE1-208ENST00000524652 TM7SF3Q9NS93 570 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 SLC38A7Q9NVC3 462 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 GDAP2Q9NXN4 497 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 SPG21Q9NZD8 308 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 IFNKQ9P0W0 207 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 GCNT4Q9P109 453 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 MDFICQ9P1T7 246 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 CDH22Q9UJ99 828 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FBXL5Q9UKA1 691 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 ITGA11Q9UKX5 1188 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 SNX9Q9Y5X1 595 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 PTGDR2Q9Y5Y4 395 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 MTCH2Q9Y6C9 303 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 FAM208BQ5VWN6 2430 aa3.05□□□□□ -1.92
CSDE1-208ENST00000524652 NUP205Q92621 2012 aa3.04□□□□□ -1.92
CSDE1-208ENST00000524652 SF3B1O75533 1304 aaKnown RBP eCLIP3.04□□□□□ -1.921e-6■■■■■ 28.6
CSDE1-208ENST00000524652 SHROOM3Q8TF72 1996 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms