RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PGM5	Q15124	567 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	RPS6KA1	Q15418	735 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	LY6K	Q17RY6	165 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	GXYLT1	Q4G148	440 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	HSP90B2P	Q58FF3	399 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	TTC39A	Q5SRH9	613 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	CCDC183	Q5T5S1	534 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	ETFRF1	Q6IPR1	90 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	HMBOX1	Q6NT76	420 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	FIP1L1	Q6UN15	594 aa	Known RBP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	KIRREL2	Q6UWL6	708 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	ZNF813	Q6ZN06	617 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	RUFY3	Q7L099	469 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	KCTD9	Q7L273	389 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	ADCK2	Q7Z695	626 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	DHX40	Q8IX18	779 aa	Known RBP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	ABRA	Q8N0Z2	381 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	SIRT6	Q8N6T7	355 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	NHLRC2	Q8NBF2	726 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	GRAPL	Q8TC17	118 aa	Predicted RBP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	ST7L	Q8TDW4	575 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	DNASE2B	Q8WZ79	361 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	WDYHV1	Q96HA8	205 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	PRR11	Q96HE9	360 aa	Predicted RBP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	ZNF333	Q96JL9	665 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	OR2A14	Q96R47	310 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	RUFY1	Q96T51	708 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	C17orf80	Q9BSJ5	609 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	TCHP	Q9BT92	498 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	NPL	Q9BXD5	320 aa	Predicted RBP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	OSGEPL1	Q9H4B0	414 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	NCOR1P1	Q9H4R4	102 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	PDZD7	Q9H5P4	517 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	SLC6A13	Q9NSD5	602 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	OLAH	Q9NV23	265 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	P4HTM	Q9NXG6	502 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	GDE1	Q9NZC3	331 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	HEY2	Q9UBP5	337 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	STEAP1	Q9UHE8	339 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	CHKB	Q9Y259	395 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	SSX2IP	Q9Y2D8	614 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	C2CD2	Q9Y426	696 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	PCDHAC2	Q9Y5I4	1007 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	CLCA3P	Q9Y6N3	262 aa		4.27	□□□□□ -1.73
PCM1-223	ENST00000524356	KIF20B	Q96Q89	1820 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	LOC100509620	A0A075B734	347 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	HTR3E	A5X5Y0	456 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	ANXA2P2	A6NMY6	339 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	KPNA7	A9QM74	516 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	SLC33A1	O00400	549 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	DSCR3	O14972	297 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	ECE2	O60344	883 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	LETM1	O95202	739 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	BCL10	O95999	233 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	GBA	P04062	536 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	MMP2	P08253	660 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	CHRM5	P08912	532 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	FAM58BP	P0C7Q3	252 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	UROS	P10746	265 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	GZMA	P12544	262 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	PDGFRA	P16234	1089 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	CYP3A7	P24462	503 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	MATR3	P43243	847 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	PTPN9	P43378	593 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	GALC	P54803	685 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	STX1B	P61266	288 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	TRA2B	P62995	288 aa	Known RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	B4GALNT1	Q00973	533 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	FAM187B	Q17R55	369 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	CERKL	Q49MI3	558 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	BOLA3	Q53S33	107 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	C9orf50	Q5SZB4	431 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	PMS2CL	Q68D20	193 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	C1orf186	Q6ZWK4	172 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	RNF144B	Q7Z419	303 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	TADA2B	Q86TJ2	420 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	CEP57	Q86XR8	500 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	VPS52	Q8N1B4	723 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	FBXW8	Q8N3Y1	598 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	HJURP	Q8NCD3	748 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	C11orf65	Q8NCR3	313 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	DBF4B	Q8NFT6	615 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	NEK11	Q8NG66	645 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	C2CD4C	Q8TF44	421 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	ZNF75CP	Q92670	426 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	BCL2L2	Q92843	193 aa	Predicted RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	TEKT1	Q969V4	418 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	PABPC5	Q96DU9	382 aa	Known RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	DAZAP1	Q96EP5	407 aa	Known RBP	4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	HS6ST2	Q96MM7	605 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	MMS19	Q96T76	1030 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	ZPBP	Q9BS86	351 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	PIMREG	Q9BSJ6	248 aa		4.26	□□□□□ -1.73
PCM1-223	ENST00000524356	IFIH1	Q9BYX4	1025 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms