RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 POU1F1P28069 291 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CRABP1P29762 137 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CYLC1P35663 651 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CAPGP40121 348 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 EIF2DP41214 584 aaKnown RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ACTR1BP42025 376 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 IL12RB1P42701 662 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SLC1A3P43003 542 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 PPP3CCP48454 512 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 PITPNBP48739 271 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CAMLGP49069 296 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 LIG4P49917 911 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TOB1P50616 345 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ADKP55263 362 aaKnown RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ARL4CP56559 192 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 BNC1Q01954 994 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ALDH6A1Q02252 535 aaKnown RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 GRIN1Q05586 938 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ZP2Q05996 745 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 EHHADHQ08426 723 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TOP3AQ13472 1001 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 UAP1Q16222 522 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 DUSP6Q16828 381 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TRIM16LQ309B1 348 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SGO1Q5FBB7 561 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 PLA2G4FQ68DD2 849 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TCEAL6Q6IPX3 200 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 PKN3Q6P5Z2 889 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 GALNT18Q6P9A2 607 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 KCNT2Q6UVM3 1135 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TMEM184AQ6ZMB5 413 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 UNC5AQ6ZN44 842 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 LINC00299Q6ZSB3 139 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ACAD11Q709F0 780 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TRIM69Q86WT6 500 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ARHGEF19Q8IW93 802 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SMRP1Q8NCR6 262 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ASB12Q8WXK4 309 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 FIG4Q92562 907 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 HAS1Q92839 578 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CD101Q93033 1021 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TMEM143Q96AN5 459 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TXNDC15Q96J42 360 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ZFYVE19Q96K21 471 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 NECTIN4Q96NY8 510 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CASD1Q96PB1 797 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 PPP1R16BQ96T49 567 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 FDXACB1Q9BRP7 624 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 MROQ9BYG7 248 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CEP41Q9BYV8 373 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 RBM38Q9H0Z9 239 aaKnown RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 FOXP1Q9H334 677 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 OR51B6Q9H340 312 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SAV1Q9H4B6 383 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 GSX1Q9H4S2 264 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 RMND5AQ9H871 391 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 COG4Q9H9E3 785 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ITM2CQ9NQX7 267 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ENTPD7Q9NQZ7 604 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 DDX19AQ9NUU7 478 aaKnown RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 FGFR1OP2Q9NVK5 253 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 THG1LQ9NWX6 298 aaKnown RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ZDHHC7Q9NXF8 308 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 KLHL14Q9P2G3 628 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SLC12A6Q9UHW9 1150 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ANAPC2Q9UJX6 822 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 POLIQ9UNA4 740 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CAMK2AQ9UQM7 478 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SLC22A7Q9Y694 548 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 DNMT3AQ9Y6K1 912 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 MAU2Q9Y6X3 613 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SPACA6W5XKT8 324 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 MN1Q10571 1320 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TRBV23OR9-2A0A075B6M9 112 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 A0A1W2PQ72 361 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 GSAPA4D1B5 854 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MFSD2BA6NFX1 497 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 C19orf67A6NJJ6 358 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 TISP43B9A030 160 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 B9A039 149 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 EML1O00423 815 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 TSPAN4O14817 238 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SLC30A4O14863 429 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 INSIG1O15503 277 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DAPK3O43293 454 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 DCXO43602 365 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 AKAP8O43823 692 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 TBX10O75333 385 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 BCAS2O75934 225 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 ZFPL1O95159 310 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 LGI1O95970 557 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 OAS1P00973 400 aaKnown RBP7.41□□□□□ -1.22
HDAC3-216ENST00000523088 PRKCBP05771 671 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 CD63P08962 238 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 RBP1P09455 135 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 SBK2P0C263 348 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 MCF2P10911 925 aa7.41□□□□□ -1.22
HDAC3-216ENST00000523088 FGFR1P11362 822 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms