RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 RAPH1Q70E73 1250 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 CROCCP2Q86T23 111 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 SLC22A15Q8IZD6 547 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 FAM46DQ8NEK8 389 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 EEF1AKMT1Q8WVE0 214 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 WWP1Q9H0M0 922 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 DPEP2Q9H4A9 486 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 VIPAS39Q9H9C1 493 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 SYTL2Q9HCH5 934 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 PCOLCE2Q9UKZ9 415 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 WDR37Q9Y2I8 494 aa23.65■■□□□ 1.38
PVT1-212ENST00000521951 PDZK1P1A8MUH7 402 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 RFPL1O75677 317 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 C2P06681 752 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 SLC35E2BP0CK96 405 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 CBSLP0DN79 551 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 ZNF37AP17032 561 aaPredicted RBP23.64■■□□□ 1.38
PVT1-212ENST00000521951 KRT15P19012 456 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 CBSP35520 551 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 DEFB133Q30KQ1 61 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 PPM1JQ5JR12 505 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 AGAP9Q5VTM2 703 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 LVRNQ6Q4G3 990 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 WASH2PQ6VEQ5 465 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 ASCL5Q7RTU5 278 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 RUFY1Q96T51 708 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 WASH6PQ9NQA3 447 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 RXFP3Q9NSD7 469 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 ZNF446Q9NWS9 450 aa23.64■■□□□ 1.38
PVT1-212ENST00000521951 ARID1BQ8NFD5 2236 aaPredicted RBP23.64■■□□□ 1.38
PVT1-212ENST00000521951 EP300Q09472 2414 aaPredicted RBP23.64■■□□□ 1.38
PVT1-212ENST00000521951 A0A1W2PPM1 405 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 A6NCN8 305 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 NEMP2A6NFY4 417 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 MAP2K7O14733 419 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 ZNF883P0CG24 379 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 GIMD1P0DJR0 217 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 BRAFP15056 766 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 GMPRP36959 345 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 IL2P60568 153 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 UAP1L1Q3KQV9 507 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 ABRAXAS1Q6UWZ7 409 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 PRR23CQ6ZRP0 262 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 SPDYE1Q8NFV5 336 aaPredicted RBP23.64■■□□□ 1.37
PVT1-212ENST00000521951 ANKRD49Q8WVL7 239 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 DNAAF2Q9NVR5 837 aaKnown RBP23.64■■□□□ 1.37
PVT1-212ENST00000521951 SCHIP1Q9P0W5 487 aaPredicted RBP23.64■■□□□ 1.37
PVT1-212ENST00000521951 TSR3Q9UJK0 312 aaKnown RBP23.64■■□□□ 1.37
PVT1-212ENST00000521951 TLK1Q9UKI8 766 aa23.64■■□□□ 1.37
PVT1-212ENST00000521951 A0A096LPK6 155 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 AGPSO00116 658 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 EIF3FO00303 357 aaPredicted RBP23.63■■□□□ 1.37
PVT1-212ENST00000521951 DYNC1I1O14576 645 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 CDX4O14627 284 aaPredicted RBP23.63■■□□□ 1.37
PVT1-212ENST00000521951 FFAR2O15552 330 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 PCDHGA12O60330 932 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 TSPAN12O95859 305 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 MT-ND3P03897 115 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 SLC35G4P0C7Q5 338 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 ENO3P13929 434 aaPredicted RBP23.63■■□□□ 1.37
PVT1-212ENST00000521951 ATP5DP30049 168 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 RGS4P49798 205 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 CLCA4Q14CN2 919 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 CAPRIN2Q6IMN6 1127 aaKnown RBP23.63■■□□□ 1.37
PVT1-212ENST00000521951 CYHR1Q6ZMK1 362 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 NKAPQ8N5F7 415 aaKnown RBP23.63■■□□□ 1.37
PVT1-212ENST00000521951 LINGO1Q96FE5 620 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 RMDN2Q96LZ7 410 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 EDEM2Q9BV94 578 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.63■■□□□ 1.37
PVT1-212ENST00000521951 ACOT9Q9Y305 439 aa23.63■■□□□ 1.37
PVT1-212ENST00000521951 RGS16O15492 202 aaPredicted RBP23.62■■□□□ 1.37
PVT1-212ENST00000521951 SASH3O75995 380 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 MPOP05164 745 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 F3P13726 295 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 ACADLP28330 430 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 NEK10Q6ZWH5 1172 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 PDZD3Q86UT5 571 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 SFTPA2Q8IWL1 248 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 ZDHHC1Q8WTX9 485 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 PDLIM5Q96HC4 596 aaKnown RBP23.62■■□□□ 1.37
PVT1-212ENST00000521951 UBXN10Q96LJ8 280 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 INSM2Q96T92 566 aaPredicted RBP23.62■■□□□ 1.37
PVT1-212ENST00000521951 VPS11Q9H270 941 aa23.62■■□□□ 1.37
PVT1-212ENST00000521951 DNAH14Q0VDD8 3507 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 TRBV23OR9-2A0A075B6M9 112 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 A0A087X1B8 175 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 CCDC166P0CW27 439 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 MPC1LP0DKB6 136 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 ABRQ12979 859 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 TAF1BQ53T94 588 aaPredicted RBP23.61■■□□□ 1.37
PVT1-212ENST00000521951 IYDQ6PHW0 289 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 PIWIL4Q7Z3Z4 852 aaKnown RBP23.61■■□□□ 1.37
PVT1-212ENST00000521951 CCDC91Q7Z6B0 441 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 NAGSQ8N159 534 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 CENPHQ9H3R5 247 aa23.61■■□□□ 1.37
PVT1-212ENST00000521951 ZFHX2Q9C0A1 2572 aaPredicted RBP23.61■■□□□ 1.37
PVT1-212ENST00000521951 B4DGG1 531 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 HALP42357 657 aa23.6■■□□□ 1.37
PVT1-212ENST00000521951 IRF9Q00978 393 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms