RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 HES3Q5TGS1 186 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 C3orf62Q6ZUJ4 267 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 TMEM26Q6ZUK4 368 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 OTOAQ7RTW8 1153 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 SLC22A15Q8IZD6 547 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 CHCHD4Q8N4Q1 142 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 EIF1ADQ8N9N8 165 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 LRRN4CLQ8ND94 238 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 C9orf72Q96LT7 481 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 DPYSL5Q9BPU6 564 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 KCNK4Q9NYG8 393 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 CDYLQ9Y232 598 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 COLEC10Q9Y6Z7 277 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 PTPRBP23467 1997 aa13.47□□□□□ -0.25
CTNNA1-226ENST00000521368 IGHV1OR21-1A0A087WYE8 117 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 A0A1W2PQM1 296 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 D6RAR5 112 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 E5RI56 91 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 B4GAT1O43505 415 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 NIPSNAP2O75323 286 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 MT-CO3P00414 261 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 AHSGP02765 367 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 RPLP0P05388 317 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 RHOXF2BP0C7M4 288 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 ITGB6P18564 788 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 CHRM3P20309 590 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 CD9P21926 228 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 ACADLP28330 430 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 GABRB3P28472 473 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 ALDH4A1P30038 563 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 ATP5DP30049 168 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 STX2P32856 288 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 OR1D5P58170 312 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 GPX6P59796 221 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 CCL7P80098 99 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 SHC2P98077 582 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 HSPA14Q0VDF9 509 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 FOXC1Q12948 553 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 SPIDRQ14159 915 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 GBX1Q14549 363 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 ZNF549Q6P9A3 640 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 CNSTQ6PJW8 725 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 DCBLD1Q8N8Z6 715 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 Q8N9G6 341 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 OR10G6Q8NH81 332 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 CDKL2Q92772 493 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 RHOXF2Q9BQY4 288 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 AARSD1Q9BTE6 412 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 KIR3DX1Q9H7L2 352 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 MVB12BQ9H7P6 319 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 LRRC4CQ9HCJ2 640 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 IMP3Q9NV31 184 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 CLCA2Q9UQC9 943 aa13.46□□□□□ -0.25
CTNNA1-226ENST00000521368 CACNA1AO00555 2505 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 FAM159BA6NKW6 160 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 DUX1O43812 170 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 HYAL3O43820 417 aaPredicted RBP13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 CPNE6O95741 557 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 CD1CP29017 333 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 CLCN7P51798 805 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 FOXK2Q01167 660 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 GPR18Q14330 331 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 BRD3Q15059 726 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 CAPN12Q6ZSI9 719 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 ZBTB2Q8N680 514 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 TFGQ92734 400 aaPredicted RBP13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 DEPDC7Q96QD5 511 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 MED16Q9Y2X0 877 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 CFAP20Q9Y6A4 193 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 CNOT1A5YKK6 2376 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-226ENST00000521368 RP1P56715 2156 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 MED19A0JLT2 244 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 EIF3FO00303 357 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 VPS26AO75436 327 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 SLU7O95391 586 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 C1QAP02745 245 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 F7P08709 466 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 JUPP14923 745 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 SKIV2L2P42285 1042 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 NAB1Q13506 487 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 SLMAPQ14BN4 828 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 TTLL9Q3SXZ7 439 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 UGT3A1Q6NUS8 523 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 DUS1LQ6P1R4 473 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 WDR74Q6RFH5 385 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 UNC5DQ6UXZ4 953 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 NAPRTQ6XQN6 538 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 NEK10Q6ZWH5 1172 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 STRA8Q7Z7C7 330 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 PIM3Q86V86 326 aa13.44□□□□□ -0.26
CTNNA1-226ENST00000521368 ZNF761Q86XN6 746 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 511.1 ms