RNA–Protein interactions for RNA: ENST00000521261.1

MCM4-213, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 1,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-213ENST00000521261 CLCN3P51790 818 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 ARF3P61204 181 aaPredicted RBP4.53□□□□□ -1.68
MCM4-213ENST00000521261 ARF1P84077 181 aaKnown RBP4.53□□□□□ -1.68
MCM4-213ENST00000521261 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 MAMLD1Q13495 774 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 GIT2Q14161 759 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 MYBPC2Q14324 1141 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 PTGR1Q14914 329 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 NONOQ15233 471 aaKnown RBP eCLIP4.53□□□□□ -1.68
MCM4-213ENST00000521261 GSTA3Q16772 222 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 TMEM266Q2M3C6 531 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 CXorf66Q5JRM2 361 aaPredicted RBP4.53□□□□□ -1.68
MCM4-213ENST00000521261 C16orf54Q6UWD8 224 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 ZNF410Q86VK4 478 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 TMC8Q8IU68 726 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 ADHFE1Q8IWW8 467 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 ZDHHC23Q8IYP9 409 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 MMP21Q8N119 569 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 LRRC43Q8N309 656 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 NOC3LQ8WTT2 800 aaKnown RBP4.53□□□□□ -1.68
MCM4-213ENST00000521261 TCP11Q8WWU5 503 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 FAM20AQ96MK3 541 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 ZNF778Q96MU6 729 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 ZNF558Q96NG5 402 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 H2AFJQ9BTM1 129 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 TRMOQ9BU70 441 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 C1QTNF5Q9BXJ0 243 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 TMEM117Q9H0C3 514 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 CDT1Q9H211 546 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 FBRSL1Q9HCM7 1045 aaKnown RBP4.53□□□□□ -1.68
MCM4-213ENST00000521261 PDRG1Q9NUG6 133 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 HAUS2Q9NVX0 235 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 ELOVL5Q9NYP7 299 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 VPS54Q9P1Q0 977 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 HS3ST3B1Q9Y662 390 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 NLRC5Q86WI3 1866 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 PRRC2BQ5JSZ5 2229 aaKnown RBP4.53□□□□□ -1.68
MCM4-213ENST00000521261 COL4A4P53420 1690 aaPredicted RBP4.53□□□□□ -1.68
MCM4-213ENST00000521261 TTC3P53804 2025 aa4.53□□□□□ -1.68
MCM4-213ENST00000521261 LY6G6EA0A0G2JKS1 128 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 EIF3CLB5ME19 914 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 J3KR12 359 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MSH4O15457 936 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 HNRNPCL1O60812 293 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 PSMD10O75832 226 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 NKX2-2O95096 273 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MT-CYBP00156 380 aaPredicted RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 VTNP04004 478 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 KRT10P13645 584 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 ETFAP13804 333 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 HOXB8P17481 243 aaPredicted RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 HOXD13P35453 343 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 ACTN2P35609 894 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 GARSP41250 739 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 QARSP47897 775 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 ME1P48163 572 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 NRIP1P48552 1158 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 COMPP49747 757 aaPredicted RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 GPC3P51654 580 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 PSMC5P62195 406 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MRPS21P82921 87 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 PRKCEQ02156 737 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 FAM27E3Q08E93 113 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 HYAL1Q12794 435 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 COASYQ13057 564 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 TRIM29Q14134 588 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 HNF4GQ14541 408 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 C2orf68Q2NKX9 166 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 PRTGQ2VWP7 1150 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 LETM2Q2VYF4 491 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MMEL1Q495T6 779 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MANEAQ5SRI9 462 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 TWF2Q6IBS0 349 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 Q6ZTK2 550 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 RBM23Q86U06 439 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 FAM228AQ86W67 206 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 HACE1Q8IYU2 909 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 RBFAQ8N0V3 343 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 ZCCHC9Q8N567 271 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 ARFGAP1Q8N6T3 406 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 NEXN-AS1Q8NBZ9 246 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 CNNM3Q8NE01 707 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 ZMIZ2Q8NF64 920 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MRPS27Q92552 414 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 CASP10Q92851 521 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 SMARCE1Q969G3 411 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 RPL36ALQ969Q0 106 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 URB1-AS1Q96HZ7 61 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 CCDC43Q96MW1 224 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 ISCUQ9H1K1 167 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MAGEE1Q9HCI5 957 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 BPIFA1Q9NP55 256 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 CYSLTR2Q9NS75 346 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 DECR2Q9NUI1 292 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 CISD1Q9NZ45 108 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 SPG21Q9NZD8 308 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 DDX25Q9UHL0 483 aaKnown RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 FBXO2Q9UK22 296 aaPredicted RBP4.52□□□□□ -1.69
MCM4-213ENST00000521261 RAI2Q9Y5P3 530 aa4.52□□□□□ -1.69
MCM4-213ENST00000521261 MYH9P35579 1960 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms