RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 SPATA13Q96N96 652 aa14.78□□□□□ -0.04
CSMD1-207ENST00000520451 COPS8Q99627 209 aa14.78□□□□□ -0.04
CSMD1-207ENST00000520451 TBL1YQ9BQ87 522 aa14.78□□□□□ -0.04
CSMD1-207ENST00000520451 CCM2Q9BSQ5 444 aa14.78□□□□□ -0.04
CSMD1-207ENST00000520451 GPR87Q9BY21 358 aa14.78□□□□□ -0.04
CSMD1-207ENST00000520451 HEBP2Q9Y5Z4 205 aa14.78□□□□□ -0.04
CSMD1-207ENST00000520451 CCDC66A2RUB6 948 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 RCCD1A6NED2 376 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 SOWAHDA6NJG2 315 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 AGAP14A8MT82 685 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 CCL22O00626 93 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 PTPN4P29074 926 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 RWDD2BP57060 319 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 PRKAA1Q13131 559 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 MSLNQ13421 630 aaPredicted RBP14.77□□□□□ -0.05
CSMD1-207ENST00000520451 UGT8Q16880 541 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 AADACL2Q6P093 401 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 SNX20Q7Z614 316 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 CARFQ8N187 725 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 TEX19Q8NA77 164 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 ACVR1CQ8NER5 493 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 OR4E2Q8NGC2 313 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 OR8K5Q8NH50 307 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 HEXDCQ8WVB3 486 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 SEC14L1Q92503 715 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 MR1Q95460 341 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 ZNF501Q96CX3 271 aaPredicted RBP14.77□□□□□ -0.05
CSMD1-207ENST00000520451 PPP1R2P1Q96PQ5 205 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 TLR10Q9BXR5 811 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 KCND1Q9NSA2 647 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 PLAAQ9Y263 795 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 LRRK2Q5S007 2527 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 NAV2Q8IVL1 2488 aa14.77□□□□□ -0.05
CSMD1-207ENST00000520451 GSAPA4D1B5 854 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 DDX3YO15523 660 aaKnown RBP14.76□□□□□ -0.05
CSMD1-207ENST00000520451 DNAJB5O75953 348 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 TJP3O95049 919 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 ATP1B2P14415 290 aaPredicted RBP14.76□□□□□ -0.05
CSMD1-207ENST00000520451 CDH3P22223 829 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 HADHAP40939 763 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 CETN2P41208 172 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 GPS2Q13227 327 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 SEMA5AQ13591 1074 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 IL10RAQ13651 578 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 UBAP2LQ14157 1087 aaKnown RBP14.76□□□□□ -0.05
CSMD1-207ENST00000520451 DENND5AQ6IQ26 1287 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 SYVN1Q86TM6 617 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 APLFQ8IW19 511 aaPredicted RBP14.76□□□□□ -0.05
CSMD1-207ENST00000520451 LCN9Q8WX39 176 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 LRRC45Q96CN5 670 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 DNAJC1Q96KC8 554 aaKnown RBP14.76□□□□□ -0.05
CSMD1-207ENST00000520451 CALR3Q96L12 384 aaKnown RBP14.76□□□□□ -0.05
CSMD1-207ENST00000520451 TRIM55Q9BYV6 548 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 SRMSQ9H3Y6 488 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 COG4Q9H9E3 785 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 FANCEQ9HB96 536 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 POMT2Q9UKY4 750 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 BTRCQ9Y297 605 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 DUSP10Q9Y6W6 482 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 DOPEY2Q9Y3R5 2298 aa14.76□□□□□ -0.05
CSMD1-207ENST00000520451 SLC9B1P1A6NJY1 282 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 MATN2O00339 956 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 IFRD1O00458 451 aaPredicted RBP14.75□□□□□ -0.05
CSMD1-207ENST00000520451 LDB2O43679 373 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 IPO7O95373 1038 aaKnown RBP14.75□□□□□ -0.05
CSMD1-207ENST00000520451 MC4RP32245 332 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 CDKN1CP49918 316 aaPredicted RBP14.75□□□□□ -0.05
CSMD1-207ENST00000520451 ZRANB3Q5FWF4 1079 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 PRAMEF17Q5VTA0 474 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 CPZQ66K79 652 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 SLC38A9Q8NBW4 561 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 THAP4Q8WY91 577 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 ALG3Q92685 438 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 MIB2Q96AX9 1013 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 PANX2Q96RD6 677 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 FERD3LQ96RJ6 166 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 C19orf43Q9BQ61 176 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 CHST8Q9H2A9 424 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 VPS37BQ9H9H4 285 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 ARNT2Q9HBZ2 717 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 LATS2Q9NRM7 1088 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 C1GALT1Q9NS00 363 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 ZDHHC3Q9NYG2 299 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 ANKMY1Q9P2S6 941 aa14.75□□□□□ -0.05
CSMD1-207ENST00000520451 FEZ2Q9UHY8 353 aaPredicted RBP14.75□□□□□ -0.05
CSMD1-207ENST00000520451 FARSAQ9Y285 508 aaKnown RBP14.75□□□□□ -0.05
CSMD1-207ENST00000520451 EPN1Q9Y6I3 576 aaPredicted RBP14.75□□□□□ -0.05
CSMD1-207ENST00000520451 C17orf113A0A1B0GUU1 675 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 TMEM150CB9EJG8 249 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 ZNF189O75820 626 aaPredicted RBP14.74□□□□□ -0.05
CSMD1-207ENST00000520451 PDGFAP04085 211 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 PTMAP06454 111 aaKnown RBP14.74□□□□□ -0.05
CSMD1-207ENST00000520451 KLK3P07288 261 aaPredicted RBP14.74□□□□□ -0.05
CSMD1-207ENST00000520451 ACRV1P26436 265 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 MLLT10P55197 1068 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 GSDMDP57764 484 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 SRSF1Q07955 248 aaKnown RBP eCLIP14.74□□□□□ -0.05
CSMD1-207ENST00000520451 ABRQ12979 859 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 CHAF1BQ13112 559 aa14.74□□□□□ -0.05
CSMD1-207ENST00000520451 LAMB3Q13751 1172 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms