RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 VDRP11473 427 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 KRT5P13647 590 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 DAOP14920 347 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 UCHL3P15374 230 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ZNF18P17022 549 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 GNLYP22749 145 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 WARSP23381 471 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 ITGB8P26012 769 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CASP1P29466 404 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ADSSP30520 456 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CTNNB1P35222 781 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 NSFP46459 744 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 GCLMP48507 274 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 AMTP48728 403 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CASP5P51878 434 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CRIP2P52943 208 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 NAP1L1P55209 391 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 POLR2FP61218 127 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 RPL10AP62906 217 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 NOP14P78316 857 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 SHC2P98077 582 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 NSUN2Q08J23 767 aaKnown RBP eCLIP1.9□□□□□ -2.11
CCNC-208ENST00000519617 KLHL30Q0D2K2 578 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 DRP2Q13474 957 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CUL2Q13617 745 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 GALNT3Q14435 633 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 HNF4GQ14541 408 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 KRT31Q15323 416 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 UPP1Q16831 310 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 LRIT3Q3SXY7 679 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 MINDY4Q4G0A6 757 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CTXN3Q4LDR2 81 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ARHGAP15Q53QZ3 475 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 XKR4Q5GH76 650 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CYP4A22Q5TCH4 519 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 KLHDC7AQ5VTJ3 777 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 PMS2CLQ68D20 193 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 JADE1Q6IE81 842 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CES5AQ6NT32 575 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ERAP2Q6P179 960 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 WDR93Q6P2C0 686 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 TRIM65Q6PJ69 517 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ALKAL1Q6UXT8 129 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 C11orf57Q6ZUT1 292 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 TOGARAM2Q6ZUX3 1019 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ZNF771Q7L3S4 317 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 RRAGAQ7L523 313 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 FJX1Q86VR8 437 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CEP57Q86XR8 500 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CBWD2Q8IUF1 395 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 VSTM4Q8IW00 320 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CCDC117Q8IWD4 279 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 DCUN1D3Q8IWE4 304 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CCDC28AQ8IWP9 274 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 DHX40Q8IX18 779 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 ZC3H3Q8IXZ2 948 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 ADGRF2Q8IZF7 708 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 SYCE1Q8N0S2 351 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 FAM185AQ8N0U4 392 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 SIX6OS1Q8N1H7 587 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ZNF557Q8N988 423 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 TMEM35BQ8NCS4 154 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 FAM156AQ8NDB6 213 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 C1orf131Q8NDD1 294 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 SPPL2BQ8TCT7 592 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 HDAC7Q8WUI4 952 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 CASP10Q92851 521 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 C18orf25Q96B23 403 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 TIFAQ96CG3 184 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 LRRC45Q96CN5 670 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 SMARCD1Q96GM5 515 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ZNF419Q96HQ0 510 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 HSFY1Q96LI6 401 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 NECTIN4Q96NY8 510 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ALS2CR12Q96Q35 445 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 GAD1Q99259 594 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 BAG1Q99933 345 aaPredicted RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 DDX50Q9BQ39 737 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 FERMT1Q9BQL6 677 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 PAAF1Q9BRP4 392 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 MED10Q9BTT4 135 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 FUCA2Q9BTY2 467 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.9□□□□□ -2.11
CCNC-208ENST00000519617 SORBS1Q9BX66 1292 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 EIF2AQ9BY44 585 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 UBXN6Q9BZV1 441 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 UNKQ9C0B0 810 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 MTMR12Q9C0I1 747 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 GPR88Q9GZN0 384 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 ELOVL4Q9GZR5 314 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 NACA2Q9H009 215 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 BTBD1Q9H0C5 482 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 INTS2Q9H0H0 1204 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 NXF3Q9H4D5 531 aaKnown RBP1.9□□□□□ -2.11
CCNC-208ENST00000519617 PLEKHA4Q9H4M7 779 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 MINDY3Q9H8M7 445 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 LRRC4Q9HBW1 653 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 PDE11AQ9HCR9 933 aa1.9□□□□□ -2.11
CCNC-208ENST00000519617 PNPLA8Q9NP80 782 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms