RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 LY6DQ14210 128 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 TAF1BQ53T94 588 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-215ENST00000519474 IRGCQ6NXR0 463 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 DUS1LQ6P1R4 473 aaKnown RBP9.11□□□□□ -0.95
HDAC3-215ENST00000519474 CERS6Q6ZMG9 384 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 PPP1R21Q6ZMI0 780 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 ZNF534Q76KX8 674 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 PRSS42Q7Z5A4 293 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 RASGEF1CQ8N431 466 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 CCDC89Q8N998 374 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 OR4E2Q8NGC2 313 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 HM13Q8TCT9 377 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 MAIP1Q8WWC4 291 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 SLC41A2Q96JW4 573 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 RMDN2Q96LZ7 410 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 ALS2CR12Q96Q35 445 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 OR6C1Q96RD1 312 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 FERD3LQ96RJ6 166 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 ZPBPQ9BS86 351 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 SEMA4CQ9C0C4 833 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 KIR3DX1Q9H7L2 352 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 COG4Q9H9E3 785 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 CHRAC1Q9NRG0 131 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 HRASLS2Q9NWW9 162 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 SLC24A2Q9UI40 661 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 ZKSCAN5Q9Y2L8 839 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 COLEC10Q9Y6Z7 277 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 LAMA5O15230 3695 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 AHCTF1Q8WYP5 2266 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 FAM208BQ5VWN6 2430 aa9.11□□□□□ -0.95
HDAC3-215ENST00000519474 TCRBV7S3A2A0A539 114 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 SLC5A10A0PJK1 596 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 OR6C74A6NCV1 312 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 OR5K3A6NET4 321 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 EIF4E1BA6NMX2 242 aaKnown RBP9.1□□□□□ -0.95
HDAC3-215ENST00000519474 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-215ENST00000519474 E7EVH7 732 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 OR1I1O60431 355 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 SPAG6O75602 509 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 RASSF9O75901 435 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 STK17BO94768 372 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 AP2A2O94973 939 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 DLGAP3O95886 979 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 TPBGLP0DKB5 382 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 FGF5P12034 268 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 POLR2CP19387 275 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-215ENST00000519474 ACADLP28330 430 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 NDUFS1P28331 727 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 NSG1P42857 185 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 CAPZBP47756 277 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 ATP1A2P50993 1020 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 RPA4Q13156 261 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 LAMB3Q13751 1172 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 SEMA3AQ14563 771 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 ITIH4Q14624 930 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 IL11RAQ14626 422 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 C11orf91Q3C1V1 193 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 PCID2Q5JVF3 399 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 KLHL35Q6PF15 583 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 FBXO38Q6PIJ6 1188 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 C4orf22Q6V702 233 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 NAPRTQ6XQN6 538 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 NLGN4XQ8N0W4 816 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 ZNF843Q8N446 348 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 IL22RA1Q8N6P7 574 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 NLGN4YQ8NFZ3 816 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-215ENST00000519474 OR4L1Q8NH43 312 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 UBXN4Q92575 508 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 TFGQ92734 400 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-215ENST00000519474 EXTL1Q92935 676 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 RNF31Q96EP0 1072 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 MS4A14Q96JA4 679 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 ELMO2Q96JJ3 720 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 PPM1MQ96MI6 270 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 AKIRIN1Q9H9L7 192 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-215ENST00000519474 GRPEL1Q9HAV7 217 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 JRKLQ9Y4A0 524 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 TCAF1Q9Y4C2 921 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 PCDHGA4Q9Y5G9 962 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 HEBP2Q9Y5Z4 205 aa9.1□□□□□ -0.95
HDAC3-215ENST00000519474 ZNF106Q9H2Y7 1883 aaKnown RBP9.09□□□□□ -0.95
HDAC3-215ENST00000519474 CHD6Q8TD26 2715 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 BTN3A3O00478 584 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 NKX2-8O15522 239 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 TIAF1O95411 115 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 GAS8O95995 478 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 GSTM1P09488 218 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 SLC35G4P0C7Q5 338 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 LIFP15018 202 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 F8A1P23610 371 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 NMBRP28336 390 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 PREPP48147 710 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 ARCN1P48444 511 aaKnown RBP9.09□□□□□ -0.95
HDAC3-215ENST00000519474 KPNA2P52292 529 aaKnown RBP9.09□□□□□ -0.95
HDAC3-215ENST00000519474 SESN2P58004 480 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-215ENST00000519474 CRADDP78560 199 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 GSTM4Q03013 218 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 ABHD18Q0P651 414 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 C19orf57Q0VDD7 668 aa9.09□□□□□ -0.95
HDAC3-215ENST00000519474 PRKG2Q13237 762 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms