RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 FAM92BQ6ZTR7 304 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 TMEM139Q8IV31 216 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 CDKL3Q8IVW4 592 aaPredicted RBP9.44□□□□□ -0.9
TTC1-202ENST00000518560 LILRA3Q8N6C8 439 aaPredicted RBP9.44□□□□□ -0.9
TTC1-202ENST00000518560 LRRC57Q8N9N7 239 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 PLPP7Q8NBV4 271 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 MRFAP1L1Q96HT8 127 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 C9orf72Q96LT7 481 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 TTC25Q96NG3 672 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 VAT1Q99536 393 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 NRTNQ99748 197 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 B3GNT4Q9C0J1 378 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 TRABDQ9H4I3 376 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 FAM96AQ9H5X1 160 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 SLC40A1Q9NP59 571 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 POT1Q9NUX5 634 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 PIH1D1Q9NWS0 290 aaKnown RBP9.44□□□□□ -0.9
TTC1-202ENST00000518560 HACD3Q9P035 362 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 IL17BQ9UHF5 180 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 PILRAQ9UKJ1 303 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.44□□□□□ -0.9
TTC1-202ENST00000518560 PKP3Q9Y446 797 aa9.44□□□□□ -0.9
TTC1-202ENST00000518560 TCRBV7S2A1N4TA0A589 114 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 CCDC78A2IDD5 438 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 B8ZZF3 427 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 NKX2-8O15522 239 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 DDX3YO15523 660 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 SGTAO43765 313 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 POP7O75817 140 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 RASSF9O75901 435 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 ANXA9O76027 345 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 TIAF1O95411 115 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 DLGAP3O95886 979 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 EPOP01588 193 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 ITGB6P18564 788 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 TNNT3P45378 269 aaPredicted RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 CAPZBP47756 277 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 ARCN1P48444 511 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 CDKN1CP49918 316 aaPredicted RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 RWDD2BP57060 319 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 XIAPP98170 497 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 MSLNQ13421 630 aaPredicted RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 KCNAB1Q14722 419 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 RPE65Q16518 533 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 LDLRAP1Q5SW96 308 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 ITPRIPL1Q6GPH6 555 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 DENND5AQ6IQ26 1287 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 DARS2Q6PI48 645 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 FBXO38Q6PIJ6 1188 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 CEACAM20Q6UY09 585 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 AMZ2Q86W34 360 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 PLXDC1Q8IUK5 500 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 TMTC1Q8IUR5 882 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 NLGN4XQ8N0W4 816 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 NLGN4YQ8NFZ3 816 aaPredicted RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 ZNF398Q8TD17 642 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 PPM1MQ96MI6 270 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 SPATA13Q96N96 652 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 OR6C1Q96RD1 312 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 SRPK1Q96SB4 655 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 TBL1YQ9BQ87 522 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 ASPSCR1Q9BZE9 553 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 WWP1Q9H0M0 922 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 ZNF768Q9H5H4 540 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 GPN2Q9H9Y4 310 aaPredicted RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 UCK1Q9HA47 277 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 LUC7LQ9NQ29 371 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 IMP3Q9NV31 184 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 TRHDEQ9UKU6 1024 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 ZNF232Q9UNY5 417 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 R3HDM2Q9Y2K5 976 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 CAPN6Q9Y6Q1 641 aa9.43□□□□□ -0.9
TTC1-202ENST00000518560 HELZ2Q9BYK8 2649 aaKnown RBP9.43□□□□□ -0.9
TTC1-202ENST00000518560 IGHV5-51A0A0C4DH38 117 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 CCDC66A2RUB6 948 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 J3QKU1 62 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 POLR1CO15160 346 aaPredicted RBP9.42□□□□□ -0.9
TTC1-202ENST00000518560 SNRNP200O75643 2136 aaKnown RBP9.42□□□□□ -0.9
TTC1-202ENST00000518560 SRP72O76094 671 aaKnown RBP9.42□□□□□ -0.9
TTC1-202ENST00000518560 ANKRD34CP0C6C1 535 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 TPH1P17752 444 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 MSH3P20585 1137 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 LPOP22079 712 aaPredicted RBP9.42□□□□□ -0.9
TTC1-202ENST00000518560 F8A1P23610 371 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 OAS2P29728 719 aaKnown RBP9.42□□□□□ -0.9
TTC1-202ENST00000518560 PTPN7P35236 360 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 HALP42357 657 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 ZNF140P52738 457 aaPredicted RBP9.42□□□□□ -0.9
TTC1-202ENST00000518560 DMPKQ09013 629 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 ITGA9Q13797 1035 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 PLCL1Q15111 1095 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 TAF1AQ15573 450 aaPredicted RBP9.42□□□□□ -0.9
TTC1-202ENST00000518560 COLEC12Q5KU26 742 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 AGAP9Q5VTM2 703 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 CACHD1Q5VU97 1274 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 WASH2PQ6VEQ5 465 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 RANBP10Q6VN20 620 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 KIAA1328Q86T90 577 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 AVL9Q8NBF6 648 aa9.42□□□□□ -0.9
TTC1-202ENST00000518560 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms