RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 GCNT3O95395 438 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 NADKO95544 446 aaPredicted RBP3.51□□□□□ -1.85
LINC01088-211ENST00000515597 SRPRAP08240 638 aaKnown RBP3.51□□□□□ -1.85
LINC01088-211ENST00000515597 PLA2G4BP0C869 781 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 RARGP13631 454 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 ITGA3P26006 1051 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 MSH2P43246 934 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 RXRGP48443 463 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 GEMIN4P57678 1058 aaKnown RBP3.51□□□□□ -1.85
LINC01088-211ENST00000515597 CD81P60033 236 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 MFAP5Q13361 173 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 JADE1Q6IE81 842 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 C1orf122Q6ZSJ8 110 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 TBC1D1Q86TI0 1168 aaPredicted RBP3.51□□□□□ -1.85
LINC01088-211ENST00000515597 ANKRD52Q8NB46 1076 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 CCDC34Q96HJ3 373 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 C1QTNF1Q9BXJ1 281 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 SEMA6AQ9H2E6 1030 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 SIX2Q9NPC8 291 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 PAK5Q9P286 719 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 DNAJB4Q9UDY4 337 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 KCNJ14Q9UNX9 436 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 PRSS21Q9Y6M0 314 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 IQSEC2Q5JU85 1478 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 ZNF318Q5VUA4 2279 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 FHAD1B1AJZ9 1412 aa3.51□□□□□ -1.85
LINC01088-211ENST00000515597 MAGI3Q5TCQ9 1506 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 MAGEB17A8MXT2 336 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 A8MZ25 164 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 TMEM189-UBE2V1I3L0A0 370 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 AP3D1O14617 1153 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 TCERG1O14776 1098 aaKnown RBP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 HS6ST1O60243 411 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 CLPTM1O96005 669 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 CEACAM1P13688 526 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 CAPN3P20807 821 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 EPHA2P29317 976 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 MAP2K2P36507 400 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 CLNS1AP54105 237 aaKnown RBP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 CDH8P55286 799 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 UBE2V1Q13404 147 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 MEP1AQ16819 746 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 ZFP69Q49AA0 526 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 RARS2Q5T160 578 aaKnown RBP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 ZDHHC20Q5W0Z9 365 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 ZNF790Q6PG37 636 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 CFAP77Q6ZQR2 320 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 GALNT13Q8IUC8 556 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 PLD3Q8IV08 490 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 GPALPP1Q8IXQ4 340 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 C1orf131Q8NDD1 294 aaKnown RBP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 DDHD1Q8NEL9 900 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 ZNF689Q96CS4 500 aaPredicted RBP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 ELMOD3Q96FG2 381 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 SLC47A1Q96FL8 570 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 PGAM5Q96HS1 289 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 OR2A14Q96R47 310 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 OPRPNQ99935 248 aaPredicted RBP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 CDK19Q9BWU1 502 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 FTOQ9C0B1 505 aaKnown RBP eCLIP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 SYNCQ9H7C4 482 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 FGF22Q9HCT0 170 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 ZDHHC18Q9NUE0 388 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 SEPT11Q9NVA2 429 aaKnown RBP3.5□□□□□ -1.85
LINC01088-211ENST00000515597 SETD4Q9NVD3 440 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 COQ3Q9NZJ6 369 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 TSPYL4Q9UJ04 414 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 RNF215Q9Y6U7 377 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 PTPRGP23470 1445 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 FRMPD1Q5SYB0 1578 aa3.5□□□□□ -1.85
LINC01088-211ENST00000515597 ARAP3Q8WWN8 1544 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 KDM5BQ9UGL1 1544 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 TEX14Q8IWB6 1497 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 FRMD3A2A2Y4 597 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 PLK4O00444 970 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 CSPG5O95196 566 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 CLTBP09497 229 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 FAM157CP0CG43 387 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 CAMPP49913 170 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 THOP1P52888 689 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 IKQ13123 557 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-211ENST00000515597 TUBB2AQ13885 445 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 TMEM187Q14656 261 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 SH2D5Q6ZV89 423 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 FASTKD5Q7L8L6 764 aaKnown RBP3.49□□□□□ -1.85
LINC01088-211ENST00000515597 SH2D6Q7Z4S9 175 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 GALNT5Q7Z7M9 940 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 TTC39CQ8N584 583 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 WDTC1Q8N5D0 677 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 L3MBTL4Q8NA19 623 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 ZNF653Q96CK0 615 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 SLC22A12Q96S37 553 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 TREX2Q9BQ50 279 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-211ENST00000515597 TUBB2BQ9BVA1 445 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 UBXN6Q9BZV1 441 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 UBA5Q9GZZ9 404 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 SMARCAD1Q9H4L7 1026 aa3.49□□□□□ -1.85
LINC01088-211ENST00000515597 DENND2DQ9H6A0 471 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms