RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ATP6V1B1P15313 513 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 GABRR2P28476 465 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 HTR1EP28566 365 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 PTPN6P29350 595 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 KCNC1P48547 511 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 PKNOX1P55347 436 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 TOR1AIP1Q5JTV8 583 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 FAM209AQ5JX71 171 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CAPN13Q6MZZ7 669 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 XKR5Q6UX68 686 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 GK5Q6ZS86 529 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 KCTD8Q6ZWB6 473 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CALHM3Q86XJ0 350 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 RFX6Q8HWS3 928 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 TP53INP2Q8IXH6 220 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 FBXL20Q96IG2 436 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SERPINB11Q96P15 392 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 TMEM209Q96SK2 561 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ILKAPQ9H0C8 392 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 KCNH6Q9H252 994 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 NOL11Q9H8H0 719 aaKnown RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CPNE5Q9HCH3 593 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ZFP14Q9HCL3 533 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SELENONQ9NZV5 590 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 DNMT3LQ9UJW3 386 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CCDC78A2IDD5 438 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 MAN2B1O00754 1011 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 NPPAP01160 153 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 AHSGP02765 367 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ITGAMP11215 1152 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 CKMT2P17540 419 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ADORA2BP29275 332 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 DAOAP59103 153 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 DYNLT1P63172 113 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 GRM3Q14832 879 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 PPP1R3AQ16821 1122 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ADPRMQ3LIE5 342 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 IL31Q6EBC2 164 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 RAB44Q7Z6P3 723 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-205ENST00000514271 LINC00523Q86TU6 105 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 GALNT6Q8NCL4 622 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 GPR150Q8NGU9 434 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 CIB1Q99828 191 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 SMOC2Q9H3U7 446 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 NECTIN3Q9NQS3 549 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 PIH1D1Q9NWS0 290 aaKnown RBP7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF840PA6NDX5 716 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 IRAK2O43187 625 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 IL33O95760 270 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 OR4Q2P0C623 313 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ERVK-10P10266 1014 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 UMPSP11172 480 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF182P17025 639 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-205ENST00000514271 MX2P20592 715 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 CD9P21926 228 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 CCNCP24863 283 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 CDH6P55285 790 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 BNIP2Q12982 314 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 BNIP3Q12983 259 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 HTR4Q13639 388 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF691Q5VV52 312 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 PLEKHG7Q6ZR37 379 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 GPR141Q7Z602 305 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 GRASPQ7Z6J2 395 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-205ENST00000514271 NPAS3Q8IXF0 933 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 YAF2Q8IY57 180 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 CPXM2Q8N436 756 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 RNF139Q8WU17 664 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 IRF7Q92985 503 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 MARVELD3Q96A59 401 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 SH3GL1Q99961 368 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 HOPXQ9BPY8 73 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-205ENST00000514271 TMEM79Q9BSE2 394 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 OSBPL10Q9BXB5 764 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ATXN3LQ9H3M9 355 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 POMKQ9H5K3 350 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 ANKHQ9HCJ1 492 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLIP1-205ENST00000514271 KLQ9UEF7 1012 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 SLC27A5Q9Y2P5 690 aa7.3□□□□□ -1.24
CLIP1-205ENST00000514271 MRPS17Q9Y2R5 130 aaKnown RBP7.3□□□□□ -1.24
CLIP1-205ENST00000514271 A0A096LPK6 155 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 NPC1O15118 1278 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 PFDN1O60925 122 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 GPC4O75487 556 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 NFATC1O95644 943 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 IFNB1P01574 187 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 APRTP07741 180 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 SRFP11831 508 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 ATP5C1P36542 298 aaKnown RBP7.29□□□□□ -1.24
CLIP1-205ENST00000514271 AVPR1AP37288 418 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 CCR3P51677 355 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 MAP3K7CLP57077 242 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 FOXK1P85037 733 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 FCHO2Q0JRZ9 810 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 OLIG2Q13516 323 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 HIST2H2ACQ16777 129 aaPredicted RBP7.29□□□□□ -1.24
CLIP1-205ENST00000514271 BRMS1LQ5PSV4 323 aa7.29□□□□□ -1.24
CLIP1-205ENST00000514271 TMC5Q6UXY8 1006 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms