RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SOCS6O14544 535 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ATP2A1O14983 1001 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ZBTB43O43298 467 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ENTPD3O75355 529 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 SOX30O94993 753 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ACAA1P09110 424 aaPredicted RBP4.17□□□□□ -1.74
HTT-210ENST00000512909 VPREB1P12018 145 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 GABRB1P18505 474 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 UBA7P41226 1012 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 GARSP41250 739 aaKnown RBP4.17□□□□□ -1.74
HTT-210ENST00000512909 SEC61BP60468 96 aaKnown RBP4.17□□□□□ -1.74
HTT-210ENST00000512909 SP3Q02447 781 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ODF3L2Q3SX64 289 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 LRIF1Q5T3J3 769 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ZDHHC20Q5W0Z9 365 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 C8orf82Q6P1X6 216 aaPredicted RBP4.17□□□□□ -1.74
HTT-210ENST00000512909 ERO1BQ86YB8 467 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 FOXP4Q8IVH2 680 aaPredicted RBP4.17□□□□□ -1.74
HTT-210ENST00000512909 POMGNT2Q8NAT1 580 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 HM13Q8TCT9 377 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 CD99L2Q8TCZ2 262 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ELP5Q8TE02 316 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 APBB2Q92870 758 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 ERO1AQ96HE7 468 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 C3orf30Q96M34 536 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 HAUS8Q9BT25 410 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 APOL6Q9BWW8 343 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 LRRCC1Q9C099 1032 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 PIGMQ9H3S5 423 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 EPB41L5Q9HCM4 733 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 GIMAP4Q9NUV9 329 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 SETD4Q9NVD3 440 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 SEC63Q9UGP8 760 aaKnown RBP4.17□□□□□ -1.74
HTT-210ENST00000512909 FBXL2Q9UKC9 423 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 VDAC3Q9Y277 283 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 AMDHD2Q9Y303 409 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 MROH7-TTC4A0A0A0MT08 1334 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 SALL1Q9NSC2 1324 aa4.17□□□□□ -1.74
HTT-210ENST00000512909 A0A0U1RQJ8 604 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 CPED1A4D0V7 1026 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 A6NL46 340 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 PDHXO00330 501 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 MAP2K7O14733 419 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 CLGNO14967 610 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 NDUFS7O75251 213 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 AVILO75366 819 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 TGFB3P10600 412 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 SRCP12931 536 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 NR2F2P24468 414 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 HOXD10P28358 340 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 ARSEP51690 589 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 GPR143P51810 404 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 TERF1P54274 439 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 TAS2R38P59533 333 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 IRX6P78412 446 aaPredicted RBP4.16□□□□□ -1.74
HTT-210ENST00000512909 ABATP80404 500 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 MRPS5P82675 430 aaKnown RBP4.16□□□□□ -1.74
HTT-210ENST00000512909 SPP2Q13103 211 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 ASTE1Q2TB18 679 aaPredicted RBP4.16□□□□□ -1.74
HTT-210ENST00000512909 TMEM35AQ53FP2 167 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 IGSF11Q5DX21 431 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 FKBP1CQ5VVH2 108 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 FRG2Q64ET8 278 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 AWAT2Q6E213 333 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 SFR1Q86XK3 245 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 DNAAF5Q86Y56 855 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 EMC1Q8N766 993 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 AVL9Q8NBF6 648 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 UTP15Q8TED0 518 aaKnown RBP4.16□□□□□ -1.74
HTT-210ENST00000512909 SCARB1Q8WTV0 552 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 RND1Q92730 232 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 RTP4Q96DX8 246 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 QRFPRQ96P65 431 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 OR2A14Q96R47 310 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 CMKLR1Q99788 373 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 ZPBPQ9BS86 351 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 KIFC3Q9BVG8 833 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 IDI2Q9BXS1 227 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 CRNKL1Q9BZJ0 848 aaKnown RBP4.16□□□□□ -1.74
HTT-210ENST00000512909 RAD21L1Q9H4I0 556 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 EBF3Q9H4W6 596 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 ESRP2Q9H6T0 727 aaKnown RBP4.16□□□□□ -1.74
HTT-210ENST00000512909 OCIAD1Q9NX40 245 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 MCM9Q9NXL9 1143 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 TAB2Q9NYJ8 693 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.16□□□□□ -1.74
HTT-210ENST00000512909 MALT1Q9UDY8 824 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 POU2F3Q9UKI9 436 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 KLHL20Q9Y2M5 609 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 CLIC4Q9Y696 253 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 SPEF2Q9C093 1822 aa4.16□□□□□ -1.74
HTT-210ENST00000512909 FAM90A8PA6NJQ4 464 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 CDRT15L2A8MXV6 281 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 J3KR12 359 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 CXCL11O14625 94 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 TIMM44O43615 452 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 PLRG1O43660 514 aaKnown RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 MITFO75030 526 aaPredicted RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 FTCDO95954 541 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 TOMM40O96008 361 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms