RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 URADA6NGE7 173 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 HEPACAM2A8MVW5 462 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 C16orf97H3BN30 126 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 CAPN9O14815 690 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 GCNT3O95395 438 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 LDLRP01130 860 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 H1F0P07305 194 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF23P17027 643 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 CKMT2P17540 419 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 MC5RP33032 325 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 MMP15P51511 669 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF75DP51815 510 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 TPD52P55327 224 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 RPS18P62269 152 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 TROAPQ12815 778 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 CAMK2DQ13557 499 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 KIR2DS5Q14953 304 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 NR1D2Q14995 579 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 CRY2Q49AN0 593 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 KRT39Q6A163 491 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 PLXDC2Q6UX71 529 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF852Q6ZMS4 543 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 PIWIL4Q7Z3Z4 852 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 NAGSQ8N159 534 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 METTL27Q8N6F8 245 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 TDRD5Q8NAT2 981 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 MRPS27Q92552 414 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 OLFM1Q99784 485 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 LRRC1Q9BTT6 524 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 ABHD6Q9BV23 337 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 CNOT10Q9H9A5 744 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 UPF2Q9HAU5 1272 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 EQTNQ9NQ60 294 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 KLHL1Q9NR64 748 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 OLAHQ9NV23 265 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 SLC38A7Q9NVC3 462 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 OSER1Q9NX31 292 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 DPP3Q9NY33 737 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 GRIP1Q9Y3R0 1128 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 JRKLQ9Y4A0 524 aa3.25□□□□□ -1.89
TRAPPC11-207ENST00000511409 MED19A0JLT2 244 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 SYNGR3O43761 229 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF500O60304 480 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 SYNCRIPO60506 623 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 EIF5BO60841 1220 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 TBX10O75333 385 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 MED24O75448 989 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 PDE9AO76083 593 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 LINGO3P0C6S8 592 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 ACP2P11117 423 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 AMD1P17707 334 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 CBLP22681 906 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 PCGF2P35227 344 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 HOXA1P49639 335 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 GAS1P54826 345 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 PITX1P78337 314 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 POU3F1Q03052 451 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 MBTD1Q05BQ5 628 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 PSMD6Q15008 389 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 TNIP1Q15025 636 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF628Q5EBL2 1059 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 TCP11X2Q5H9J9 407 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 ARMC4Q5T2S8 1044 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 RNASEH2BQ5TBB1 312 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 FAM109BQ6ICB4 259 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 TMPRSS11FQ6ZWK6 438 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 CENPVQ7Z7K6 275 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF595Q8IYB9 648 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 KBTBD3Q8NAB2 608 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 SLC4A11Q8NBS3 891 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 PAPD5Q8NDF8 572 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 DMBX1Q8NFW5 382 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 OR5M8Q8NGP6 311 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 HDAC11Q96DB2 347 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 SFXN2Q96NB2 322 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 SEPHS2Q99611 448 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 EPYCQ99645 322 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 SLX1AQ9BQ83 275 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 GPR88Q9GZN0 384 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 ANKRD2Q9GZV1 360 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 WNT5BQ9H1J7 359 aa3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 NOL11Q9H8H0 719 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 PIH1D3Q9NQM4 214 aaKnown RBP3.24□□□□□ -1.89
TRAPPC11-207ENST00000511409 ZNF541Q9H0D2 1346 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 TEX13DA0A0J9YY54 714 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 A0A1W2PS18 150 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 HYKKA2RU49 373 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 C5orf60A6NFR6 353 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 A8MXE2 369 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 H7C0S8 307 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 SPRY1O43609 319 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 CTSVO60911 334 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 SLCO2B1O94956 709 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 ERCC2P18074 760 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 EPHA2P29317 976 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 MTHFRP42898 656 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 SLC9A3P48764 834 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 RAB28P51157 221 aa3.23□□□□□ -1.89
TRAPPC11-207ENST00000511409 ERVFC1-1P60608 527 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms