RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 A6NCN8 305 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 PRR19A6NJB7 356 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 IQCF5A8MTL0 148 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 PRMT5O14744 637 aaPredicted RBP15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 C1QAP02745 245 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 GSTA2P09210 222 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 PNLIPP16233 465 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 ITGB6P18564 788 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 GABRB3P28472 473 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 FMO4P31512 558 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 LSSP48449 732 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 VSNL1P62760 191 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 TUBB4BP68371 445 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 NFE2L1Q14494 772 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 NR1D2Q14995 579 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 AMZ1Q400G9 498 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 FOXR1Q6PIV2 292 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 C3orf62Q6ZUJ4 267 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 AMZ2Q86W34 360 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 KRT222Q8N1A0 295 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 C2CD4AQ8NCU7 369 aaPredicted RBP15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 OR6C4Q8NGE1 309 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 SNIP1Q8TAD8 396 aaKnown RBP15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 WDR48Q8TAF3 677 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 LINC00615Q96LM1 132 aaPredicted RBP15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 BIRC8Q96P09 236 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 NUDT22Q9BRQ3 303 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 TSPYL1Q9H0U9 437 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 VPS37BQ9H9H4 285 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 PSAT1Q9Y617 370 aa15.23■□□□□ 0.03
SH3TC1-220ENST00000511002 A0A087WV48 116 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 RHPN2P1A8MT19 583 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 CXorf49A8MYA2 514 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 SNX2O60749 519 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 DXOO77932 396 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 HAUS5O94927 633 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 OR56A5P0C7T3 313 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 HGFP14210 728 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 RPS3P23396 243 aaKnown RBP eCLIP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 ALDH4A1P30038 563 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 EIF2S3P41091 472 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 CFHR1Q03591 330 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 DMPKQ09013 629 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 NAA30Q147X3 362 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 EFTUD2Q15029 972 aaKnown RBP eCLIP15.22■□□□□ 0.033e-6■□□□□ 10
SH3TC1-220ENST00000511002 SEPT7Q16181 437 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 ZNF658BQ4V348 819 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 NKAIN2Q5VXU1 208 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 PTRHD1Q6GMV3 140 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 ZNF549Q6P9A3 640 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 CNSTQ6PJW8 725 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 USP53Q70EK8 1073 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 LRRC6Q86X45 466 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 SLITRK4Q8IW52 837 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 SFRP1Q8N474 314 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 LILRA3Q8N6C8 439 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 EIF1ADQ8N9N8 165 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 OR2L2Q8NH16 312 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 FBF1Q8TES7 1133 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 FGF11Q92914 225 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 NAF1Q96HR8 494 aaKnown RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 CCM2Q9BSQ5 444 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 SEMA6CQ9H3T2 930 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 SCHIP1Q9P0W5 487 aaPredicted RBP15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 ZFATQ9P243 1243 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 GNPTGQ9UJJ9 305 aa15.22■□□□□ 0.03
SH3TC1-220ENST00000511002 LAMA5O15230 3695 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 CCDC187A0A096LP49 1063 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 MGAT4DA6NG13 374 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 FAM159BA6NKW6 160 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 PFDN6O15212 129 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 NIPSNAP2O75323 286 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 ACSL3O95573 720 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 FTH1P02794 183 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 VCLP18206 1134 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 CD1CP29017 333 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 CSF2RBP32927 897 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 LEPRP48357 1165 aaKnown RBP15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 CLCNKAP51800 687 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 INHBCP55103 352 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 ZFP36L1Q07352 338 aaKnown RBP15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 NAPRTQ6XQN6 538 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 ZNF574Q6ZN55 896 aaPredicted RBP15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 KIAA0408Q6ZU52 694 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 HM13Q8TCT9 377 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 FAM136AQ96C01 138 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 LIN37Q96GY3 246 aaPredicted RBP15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 TXLNGYQ9BZA5 131 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 PRDM8Q9NQV8 689 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 TMEM9Q9P0T7 183 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 LHX6Q9UPM6 363 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 VPS9D1Q9Y2B5 631 aa15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 DNMT3AQ9Y6K1 912 aaPredicted RBP15.21■□□□□ 0.03
SH3TC1-220ENST00000511002 PTPRQQ9UMZ3 2332 aa15.21■□□□□ 0.02
SH3TC1-220ENST00000511002 PDZK1P1A8MUH7 402 aa15.2■□□□□ 0.02
SH3TC1-220ENST00000511002 QSOX1O00391 747 aa15.2■□□□□ 0.02
SH3TC1-220ENST00000511002 SPAG6O75602 509 aa15.2■□□□□ 0.02
SH3TC1-220ENST00000511002 AHSGP02765 367 aa15.2■□□□□ 0.02
SH3TC1-220ENST00000511002 ESR1P03372 595 aa15.2■□□□□ 0.02
SH3TC1-220ENST00000511002 PKMP14618 531 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms