RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	CRLS1	Q9UJA2	301 aa		10.11	□□□□□ -0.79
PTPN20-222	ENST00000509774	SNX24	Q9Y343	169 aa		10.11	□□□□□ -0.79
PTPN20-222	ENST00000509774	SVIL	O95425	2214 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	IGLV3-16	A0A075B6K0	115 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	KMO	O15229	486 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	INPP4B	O15327	924 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	DNAJC6	O75061	913 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	AVIL	O75366	819 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	USP1	O94782	785 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	AP2A2	O94973	939 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	FUCA1	P04066	466 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	MSH3	P20585	1137 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ACRV1	P26436	265 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	COL8A1	P27658	744 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	DCT	P40126	519 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	NSG1	P42857	185 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	RPL21	P46778	160 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ILF3	Q12906	894 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	GTF2H3	Q13889	308 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	FRG1	Q14331	258 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ITIH4	Q14624	930 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	PTPRCAP	Q14761	206 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	HIF1A	Q16665	826 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ANKRD20A4	Q4UJ75	823 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	FASTKD1	Q53R41	847 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	GPRC6A	Q5T6X5	926 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	MRNIP	Q6NTE8	343 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	CASC4	Q6P4E1	433 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ADGRG6	Q86SQ4	1221 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	GALNT13	Q8IUC8	556 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	SRRM1	Q8IYB3	904 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	GPR150	Q8NGU9	434 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	OR6P1	Q8NGX9	317 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	OR4C6	Q8NH72	309 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	OR1E3	Q8WZA6	343 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	GLMN	Q92990	594 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ART4	Q93070	314 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	MIB2	Q96AX9	1013 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	STAMBPL1	Q96FJ0	436 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	DCUN1D1	Q96GG9	259 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZNF778	Q96MU6	729 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	COPS8	Q99627	209 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	EBNA1BP2	Q99848	306 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	TRIM51	Q9BSJ1	452 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	LRRC1	Q9BTT6	524 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	GSDMC	Q9BYG8	508 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	CARS2	Q9HA77	564 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	FGF22	Q9HCT0	170 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	FAM114A2	Q9NRY5	505 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	SYBU	Q9NX95	663 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZDHHC3	Q9NYG2	299 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ATXN10	Q9UBB4	475 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZNHIT2	Q9UHR6	403 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	TMPRSS11E	Q9UL52	423 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	SUFU	Q9UMX1	484 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	TMEM98	Q9Y2Y6	226 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	ENTPD2	Q9Y5L3	495 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	OAS3	Q9Y6K5	1087 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	FAM169A	Q9Y6X4	670 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	APC	P25054	2843 aa		10.1	□□□□□ -0.79
PTPN20-222	ENST00000509774	C17orf113	A0A1B0GUU1	675 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774		A1L4Q6	167 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CCDC162P	A2VCL2	907 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CDC14C	A4D256	554 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774		E7ESA3	106 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	GOLGA8M	H3BSY2	632 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TP73	O15350	636 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	GRID2	O43424	1007 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	AGFG2	O95081	481 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TNFSF15	O95150	251 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	GOT2	P00505	430 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ANXA6	P08133	673 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CKMT1A	P12532	417 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ATP1B2	P14415	290 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZNF8	P17098	575 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	VCL	P18206	1134 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	PGAM1	P18669	254 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	GRN	P28799	593 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	FOXN2	P32314	431 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TTPA	P49638	278 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ARSD	P51689	593 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CYP4F2	P78329	520 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CRADD	P78560	199 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TMPRSS15	P98073	1019 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ILF2	Q12905	390 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZNF542P	Q5EBM4	170 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZRANB3	Q5FWF4	1079 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	FOXR1	Q6PIV2	292 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	OGFOD3	Q6PK18	319 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	PACS1	Q6VY07	963 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CYS1	Q717R9	158 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CENPU	Q71F23	418 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TAS2R42	Q7RTR8	314 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	RD3	Q7Z3Z2	195 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	LRRTM4	Q86VH4	590 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms