RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ANP32AP39687 249 aaKnown RBP13□□□□□ -0.33
DDX41-210ENST00000509576 ARHGAP25P42331 645 aa13□□□□□ -0.33
DDX41-210ENST00000509576 XRCC4Q13426 336 aa13□□□□□ -0.33
DDX41-210ENST00000509576 RAPSNQ13702 412 aa13□□□□□ -0.33
DDX41-210ENST00000509576 TCEAL1Q15170 157 aa13□□□□□ -0.33
DDX41-210ENST00000509576 PPP2R5EQ16537 467 aa13□□□□□ -0.33
DDX41-210ENST00000509576 BCL7AQ4VC05 210 aa13□□□□□ -0.33
DDX41-210ENST00000509576 OR4E2Q8NGC2 313 aa13□□□□□ -0.33
DDX41-210ENST00000509576 OR4K2Q8NGD2 314 aa13□□□□□ -0.33
DDX41-210ENST00000509576 OR2L2Q8NH16 312 aa13□□□□□ -0.33
DDX41-210ENST00000509576 ZNF398Q8TD17 642 aa13□□□□□ -0.33
DDX41-210ENST00000509576 KRT35Q92764 455 aa13□□□□□ -0.33
DDX41-210ENST00000509576 INPP5DQ92835 1189 aa13□□□□□ -0.33
DDX41-210ENST00000509576 LINC00615Q96LM1 132 aaPredicted RBP13□□□□□ -0.33
DDX41-210ENST00000509576 LRFN5Q96NI6 719 aa13□□□□□ -0.33
DDX41-210ENST00000509576 QKIQ96PU8 341 aaKnown RBP eCLIP13□□□□□ -0.33
DDX41-210ENST00000509576 RANBP9Q96S59 729 aa13□□□□□ -0.33
DDX41-210ENST00000509576 FAM96AQ9H5X1 160 aa13□□□□□ -0.33
DDX41-210ENST00000509576 FAM60AQ9NP50 221 aa13□□□□□ -0.33
DDX41-210ENST00000509576 LATS2Q9NRM7 1088 aa13□□□□□ -0.33
DDX41-210ENST00000509576 CNTRLQ7Z7A1 2325 aa13□□□□□ -0.33
DDX41-210ENST00000509576 SVILO95425 2214 aa13□□□□□ -0.33
DDX41-210ENST00000509576 UBA6A0AVT1 1052 aaPredicted RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 BTN3A1O00481 513 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 ZNF185O15231 689 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 VPS4BO75351 444 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 KLF7O75840 302 aaPredicted RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 TMEM63AO94886 807 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 POLBP06746 335 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 PDHA2P29803 388 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 GABRA4P48169 554 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 NR2C2P49116 596 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 LMAN1P49257 510 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 ATP1A4Q13733 1029 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 ZIC1Q15915 447 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 ZNF787Q6DD87 383 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 DENND5AQ6IQ26 1287 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 RANBP10Q6VN20 620 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 BPHLQ86WA6 291 aaPredicted RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 OOSP2Q86WS3 158 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 OR8K1Q8NGG5 319 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 FLVCR1-AS1Q8TAF5 88 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 SSC4DQ8WTU2 575 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 TTC25Q96NG3 672 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 FICDQ9BVA6 458 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 MAK16Q9BXY0 300 aaKnown RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 NLNQ9BYT8 704 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 PITPNM3Q9BZ71 974 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 OR52A5Q9H2C5 316 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 NHEJ1Q9H9Q4 299 aaPredicted RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 ACSS2Q9NR19 701 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 ABHD10Q9NUJ1 306 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 KLHL8Q9P2G9 620 aaPredicted RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 ERRFI1Q9UJM3 462 aaPredicted RBP12.99□□□□□ -0.33
DDX41-210ENST00000509576 VPS4AQ9UN37 437 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 NTNG1Q9Y2I2 539 aa12.99□□□□□ -0.33
DDX41-210ENST00000509576 A6NL46 340 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 SRP72O76094 671 aaKnown RBP12.98□□□□□ -0.33
DDX41-210ENST00000509576 RAB40ALP0C0E4 278 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 HLA-DPA1P20036 260 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 RBL1P28749 1068 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 PRDX3P30048 256 aaKnown RBP12.98□□□□□ -0.33
DDX41-210ENST00000509576 AKT1P31749 480 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 PRLHRP49683 370 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 ZNF140P52738 457 aaPredicted RBP12.98□□□□□ -0.33
DDX41-210ENST00000509576 RPS15P62841 145 aaKnown RBP12.98□□□□□ -0.33
DDX41-210ENST00000509576 CRB2Q5IJ48 1285 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 FHL5Q5TD97 284 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 CDHR3Q6ZTQ4 885 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 SYTL1Q8IYJ3 562 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 CFAP206Q8IYR0 622 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 PHC3Q8NDX5 983 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 SRPK1Q96SB4 655 aaKnown RBP12.98□□□□□ -0.33
DDX41-210ENST00000509576 FAM118BQ9BPY3 351 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 GBA3Q9H227 469 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 XKR8Q9H6D3 395 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 ASB8Q9H765 288 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 ZBTB20Q9HC78 741 aaPredicted RBP12.98□□□□□ -0.33
DDX41-210ENST00000509576 SOHLH2Q9NX45 425 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 HACD3Q9P035 362 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 ALG6Q9Y672 507 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 ABCA12Q86UK0 2595 aa12.98□□□□□ -0.33
DDX41-210ENST00000509576 CSMD2Q7Z408 3487 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 IGLV3-16A0A075B6K0 115 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 TMEM150CB9EJG8 249 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 AKR1B10O60218 316 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 MFAP3LO75121 409 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 CBSLP0DN79 551 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 MSH3P20585 1137 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 PSMB4P28070 264 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 CBSP35520 551 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 TMPRSS15P98073 1019 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 MPP3Q13368 585 aa12.97□□□□□ -0.33
DDX41-210ENST00000509576 ITGA9Q13797 1035 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms