RNA–Protein interactions for RNA: ENST00000508748.5

PGM3-208, Transcript of phosphoglucomutase 3, human

TSL 5

Gene PGM3, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGM3-208	ENST00000508748	TPH1	P17752	444 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	ACRV1	P26436	265 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	OAS2	P29728	719 aa	Known RBP	11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	LMAN1	P49257	510 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	KCNC4	Q03721	635 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	MSLN	Q13421	630 aa	Predicted RBP	11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	KCNAB1	Q14722	419 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	POU6F1	Q14863	301 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	CRTC2	Q53ET0	693 aa	Predicted RBP	11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	KCTD11	Q693B1	232 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	LINC00523	Q86TU6	105 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	SERPINA9	Q86WD7	417 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	TMEM139	Q8IV31	216 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	TAB3	Q8N5C8	712 aa	Predicted RBP	11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	ACVR1C	Q8NER5	493 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	OR4E2	Q8NGC2	313 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	STYX	Q8WUJ0	223 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	APOBEC4	Q8WW27	367 aa	Known RBP	11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	SLC41A2	Q96JW4	573 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	FCRL4	Q96PJ5	515 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	FERD3L	Q96RJ6	166 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	TRIM4	Q9C037	500 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	CLMP	Q9H6B4	373 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	COG4	Q9H9E3	785 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	FANCE	Q9HB96	536 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	FGF21	Q9NSA1	209 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	NLE1	Q9NVX2	485 aa	Predicted RBP	11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	SEMA5B	Q9P283	1151 aa		11.78	□□□□□ -0.52
PGM3-208	ENST00000508748	GSAP	A4D1B5	854 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	GOLGA6L3	A6NEY3	463 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748		H7C0S8	307 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	MATN2	O00339	956 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	MAP3K7	O43318	606 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	SGTA	O43765	313 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	WISP1	O95388	367 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	AP2A1	O95782	977 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	POLR2C	P19387	275 aa	Predicted RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CDH3	P22223	829 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CDC25B	P30305	580 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	ARCN1	P48444	511 aa	Known RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CDKN1C	P49918	316 aa	Predicted RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	GDF10	P55107	478 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CACNG1	Q06432	222 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	KLF1	Q13351	362 aa	Predicted RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	DNASE1L3	Q13609	305 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	ERV3-1	Q14264	604 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	SKIDA1	Q1XH10	827 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	ATP1A1-AS1	Q5TC04	95 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	PWWP2B	Q6NUJ5	590 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	GAS2L3	Q86XJ1	694 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	PTRH1	Q86Y79	214 aa	Known RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	TMEM126B	Q8IUX1	230 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	KLHDC8B	Q8IXV7	354 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CARF	Q8N187	725 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	D2HGDH	Q8N465	521 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	RNF10	Q8N5U6	811 aa	Known RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	DNAAF3	Q8N9W5	541 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	SLC35B2	Q8TB61	432 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	LCN9	Q8WX39	176 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CDKN2AIPNL	Q96HQ2	116 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	HES6	Q96HZ4	224 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	TSGA10	Q9BZW7	698 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	SRMS	Q9H3Y6	488 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	LHX9	Q9NQ69	397 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	PIH1D1	Q9NWS0	290 aa	Known RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	POLH	Q9Y253	713 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	CAPN6	Q9Y6Q1	641 aa		11.77	□□□□□ -0.53
PGM3-208	ENST00000508748	IGLV3-16	A0A075B6K0	115 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	TRBV5-4	A0A0C4DH59	114 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748		A0A0U1RQJ8	604 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	PIPSL	A2A3N6	862 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	CCDC78	A2IDD5	438 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	CDC14C	A4D256	554 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	ERI2	A8K979	691 aa	Known RBP	11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	C21orf140	B9A014	251 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748		E7EVH7	732 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	QSOX1	O00391	747 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	SUV39H1	O43463	412 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	KRT86	O43790	486 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	CPNE3	O75131	537 aa	Known RBP	11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	SCRG1	O75711	98 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	TIAF1	O95411	115 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	IFNB1	P01574	187 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	NTRK1	P04629	796 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	GSTM1	P09488	218 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	F8A1	P23610	371 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	MSN	P26038	577 aa	Known RBP	11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	STIP1	P31948	543 aa	Known RBP	11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	NSG1	P42857	185 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	CD151	P48509	253 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	KPNA2	P52292	529 aa	Known RBP	11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	TUBB4B	P68371	445 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	GSTM4	Q03013	218 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	CDH17	Q12864	832 aa		11.76	□□□□□ -0.53
PGM3-208	ENST00000508748	LAMB3	Q13751	1172 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms