RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 CLOCKO15516 846 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 PLATP00750 562 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 CST1P01037 141 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 RHOP08100 348 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 SLC11A1P49279 550 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 RAB8AP61006 207 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 SNAPC1Q16533 368 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 SHISA6Q6ZSJ9 500 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 PHC3Q8NDX5 983 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 OR2L8Q8NGY9 312 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 SLC47A1Q96FL8 570 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 MCOLN1Q9GZU1 580 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 C11orf16Q9NQ32 467 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 NPIPA1Q9UND3 350 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 EDDM13A0A1B0GTR0 161 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 CD53P19397 219 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 CD247P20963 164 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 TSPAN5P62079 268 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 SLC9B1Q4ZJI4 515 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 FBXO46Q6PJ61 603 aaPredicted RBP8.86□□□□□ -0.99
KLHL3-209ENST00000508657 VHLLQ6RSH7 139 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 PRICKLE2Q7Z3G6 844 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 HRASLS2Q9NWW9 162 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 DNM1LO00429 736 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 ERI3O43414 337 aaKnown RBP8.86□□□□□ -0.99
KLHL3-209ENST00000508657 SNAP91O60641 907 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 SHOX2O60902 331 aaPredicted RBP8.86□□□□□ -0.99
KLHL3-209ENST00000508657 RB1P06400 928 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 VIPR2P41587 438 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 ENPP2Q13822 863 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 BRMS1LQ5PSV4 323 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 EXOC3L1Q86VI1 746 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 RNF157Q96PX1 679 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 EBNA1BP2Q99848 306 aaKnown RBP8.86□□□□□ -0.99
KLHL3-209ENST00000508657 IRF2BPLQ9H1B7 796 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 XKR8Q9H6D3 395 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 FBRSQ9HAH7 460 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 PDE7BQ9NP56 450 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 PCDHB10Q9UN67 800 aa8.86□□□□□ -0.99
KLHL3-209ENST00000508657 COL1A2P08123 1366 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 HSPA12AO43301 675 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 SUV39H1O43463 412 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 PLIN3O60664 434 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 CPNE3O75131 537 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RAB28P51157 221 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 CBX3Q13185 183 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 AGBL2Q5U5Z8 902 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 C1orf186Q6ZWK4 172 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 NMD3Q96D46 503 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 MAGEB18Q96M61 343 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 ERGIC2Q96RQ1 377 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 SEMA4AQ9H3S1 761 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 USP29Q9HBJ7 922 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 ABCB9Q9NP78 766 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 IL23AQ9NPF7 189 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RHBDL2Q9NX52 303 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 TSC22D4Q9Y3Q8 395 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 DGKBQ9Y6T7 804 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 APOC4-APOC2K7ER74 178 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 MFSD11O43934 449 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RPP14O95059 124 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 OAZ2O95190 189 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 APOC2P02655 101 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 F7P08709 466 aaPredicted RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 IFI35P80217 286 aaPredicted RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RNASEH2BQ5TBB1 312 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 KBTBD2Q8IY47 623 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 SLC34A3Q8N130 599 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 ZNF808Q8N4W9 903 aaPredicted RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RPLP0P6Q8NHW5 317 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 PXYLP1Q8TE99 480 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 CNDP2Q96KP4 475 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 NPLQ9BXD5 320 aaPredicted RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 LEFTY2O00292 366 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 PRMT5O14744 637 aaPredicted RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 SCGB1D2O95969 90 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 GOT2P00505 430 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 DBTP11182 482 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 MRPS22P82650 360 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 CDKL1Q00532 357 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 SLC25A52Q3SY17 297 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 NT5DC1Q5TFE4 455 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 PRMT9Q6P2P2 845 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 MZT2AQ6P582 158 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 CMC1Q7Z7K0 106 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 CLEC4CQ8WTT0 213 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 NAT14Q8WUY8 206 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 SFXN1Q9H9B4 322 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RIIAD1A6NNX1 92 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 KCNU1A8MYU2 1149 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RPL14P50914 215 aaKnown RBP8.85□□□□□ -0.99
KLHL3-209ENST00000508657 BCAP31P51572 246 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 RPS6KA3P51812 740 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 MPP1Q00013 466 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 SQLEQ14534 574 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 HKDC1Q2TB90 917 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 DEFB133Q30KQ1 61 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 WFIKKN2Q8TEU8 576 aa8.85□□□□□ -0.99
KLHL3-209ENST00000508657 GIPC3Q8TF64 312 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms