RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 ATG16L1Q676U5 607 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 FSTL5Q8N475 847 aaPredicted RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 RBM15BQ8NDT2 890 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 CADM4Q8NFZ8 388 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 SCG3Q8WXD2 468 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 TSPAN17Q96FV3 270 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 MAELQ96JY0 434 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 SCYL1Q96KG9 808 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 STN1Q9H668 368 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 TRIM39Q9HCM9 518 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 SUSD2Q9UGT4 822 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 SPAG17Q6Q759 2223 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 IQCF5A8MTL0 148 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 DLL1O00548 723 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 PHGDHO43175 533 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 SP9P0CG40 484 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 ATP1B2P14415 290 aaPredicted RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 CPA3P15088 417 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 STMN1P16949 149 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 CALB2P22676 271 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 RABIFP47224 123 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 KHDC1Q4VXA5 237 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 WDR5BQ86VZ2 330 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 BEND7Q8N7W2 519 aaPredicted RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 TSACCQ96A04 125 aaPredicted RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 NSL1Q96IY1 281 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 WDR92Q96MX6 357 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 SIKE1Q9BRV8 207 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 C1orf21Q9H246 121 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 GMEB2Q9UKD1 530 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 A0A088AWK7 358 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 H7C0S8 307 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 SORBS2O94875 1100 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 S1PR4O95977 384 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 KITP10721 976 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 TAS2R39P59534 338 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 TTLL9Q3SXZ7 439 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 ACSBG2Q5FVE4 666 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 TECRLQ5HYJ1 363 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 WDR75Q8IWA0 830 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 DENND6BQ8NEG7 585 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 OR13H1Q8NG92 308 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 KCTD4Q8WVF5 259 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 ATOH1Q92858 354 aaPredicted RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 TMEM159Q96B96 161 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 DRC3Q9H069 523 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 NMRAL1Q9HBL8 299 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 INTS10Q9NVR2 710 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 IKZF3Q9UKT9 509 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 CKAP5Q14008 2032 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 H3BMM5 538 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 MATN2O00339 956 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 ENTPD5O75356 428 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 FTH1P02794 183 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 IGHV4-34P06331 123 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 ACP5P13686 325 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 GCKP35557 465 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 UGT3A1Q6NUS8 523 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 PGM2L1Q6PCE3 622 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 PELI3Q8N2H9 469 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 UNKQ9C0B0 810 aaKnown RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 GPAMQ9HCL2 828 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 MBD1Q9UIS9 605 aaPredicted RBP10.81□□□□□ -0.68
PROM1-207ENST00000508167 VWA7Q9Y334 891 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 PCDHB1Q9Y5F3 818 aa10.81□□□□□ -0.68
PROM1-207ENST00000508167 PLXNA2O75051 1894 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 TMEM114B3SHH9 223 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 H0YHG0 523 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 QSOX1O00391 747 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 HRO43593 1189 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 NIPSNAP2O75323 286 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 APOA4P06727 396 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 MYCLP1P12525 358 aaPredicted RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 RACK1P63244 317 aaKnown RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 DPTQ07507 201 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 MAMSTRQ6ZN01 415 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 TRIM42Q8IWZ5 723 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 OR52B2Q96RD2 323 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 GTPBP2Q9BX10 602 aaKnown RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 LGR4Q9BXB1 951 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 PRMT8Q9NR22 394 aaPredicted RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 UBFD1O14562 309 aaKnown RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 ESR1P03372 595 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 CNR2P34972 360 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 RGS4P49798 205 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 LRRC8EQ6NSJ5 796 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 TP53I13Q8NBR0 393 aaPredicted RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 GPR150Q8NGU9 434 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 EXT2Q93063 718 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 NXNL1Q96CM4 212 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 MMADHCQ9H3L0 296 aaPredicted RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 MRPL40Q9NQ50 206 aaKnown RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 ATXN10Q9UBB4 475 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 ZDHHC2Q9UIJ5 367 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 ANKRD6Q9Y2G4 727 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 GPR179Q6PRD1 2367 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 GRK2P25098 689 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 RAB10P61026 200 aa10.8□□□□□ -0.68
PROM1-207ENST00000508167 TSTA3Q13630 321 aaPredicted RBP10.8□□□□□ -0.68
PROM1-207ENST00000508167 HECTD2Q5U5R9 776 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms