RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TCEAL6Q6IPX3 200 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 SLC30A9Q6PML9 568 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 CYHR1Q6ZMK1 362 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 CDHR3Q6ZTQ4 885 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 PIWIL4Q7Z3Z4 852 aaKnown RBP13.89□□□□□ -0.19
RNF4-208ENST00000507247 SLC22A15Q8IZD6 547 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 NKAPQ8N5F7 415 aaKnown RBP13.89□□□□□ -0.19
RNF4-208ENST00000507247 TCEAL3Q969E4 200 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 NXNL1Q96CM4 212 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 CABS1Q96KC9 395 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ATP6V1G3Q96LB4 118 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 RMDN2Q96LZ7 410 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ELF4Q99607 663 aaPredicted RBP13.89□□□□□ -0.19
RNF4-208ENST00000507247 GSDMCQ9BYG8 508 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 PRDM8Q9NQV8 689 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ZNF358Q9NW07 568 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 PSMD13Q9UNM6 376 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 RUVBL2Q9Y230 463 aaKnown RBP13.89□□□□□ -0.19
RNF4-208ENST00000507247 WDR37Q9Y2I8 494 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 ANKRD12Q6UB98 2062 aa13.89□□□□□ -0.19
RNF4-208ENST00000507247 PROB1E7EW31 1015 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 EIF3FO00303 357 aaPredicted RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 ZBTB14O43829 449 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 SPAG7O75391 227 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 KLHL2O95198 593 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 EML2O95834 649 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 LTA4HP09960 611 aaKnown RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 MPC1LP0DKB6 136 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 CBSLP0DN79 551 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 ENO3P13929 434 aaPredicted RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 BRAFP15056 766 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 CD1DP15813 335 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 RPL10P27635 214 aaKnown RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 CBSP35520 551 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 NBL1P41271 181 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 RXRGP48443 463 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 RGS4P49798 205 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 MAGOHP61326 146 aaKnown RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 HNRNPKP61978 463 aaKnown RBP eCLIP13.88□□□□□ -0.19
RNF4-208ENST00000507247 IL9RQ01113 521 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 ILF3Q12906 894 aaKnown RBP eCLIP13.88□□□□□ -0.19
RNF4-208ENST00000507247 BNIP3Q12983 259 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 RPA4Q13156 261 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 SEPT7Q16181 437 aaKnown RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 HLA-BQ31612 363 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 CCDC91Q7Z6B0 441 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 TAF8Q7Z7C8 310 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 TBC1D1Q86TI0 1168 aaPredicted RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 BANPQ8N9N5 519 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 ZNF548Q8NEK5 533 aaPredicted RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 OR2I1PQ8NGU4 316 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 LMX1AQ8TE12 382 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 PTERQ96BW5 349 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 GPR78Q96P69 363 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 DERL2Q9GZP9 239 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 WWP1Q9H0M0 922 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 STMN4Q9H169 189 aaPredicted RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 IRF2BPLQ9H1B7 796 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 DPEP2Q9H4A9 486 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 UCKL1Q9NWZ5 548 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 SCHIP1Q9P0W5 487 aaPredicted RBP13.88□□□□□ -0.19
RNF4-208ENST00000507247 SPASTQ9UBP0 616 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 TBC1D29Q9UFV1 150 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 CACNA1HO95180 2353 aa13.88□□□□□ -0.19
RNF4-208ENST00000507247 A0A1B0GTQ1 180 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 A6NCN8 305 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 NPEPPSL1A6NEC2 478 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 H3BQF6 201 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 CDC7O00311 574 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 AQP9O43315 295 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 SNX2O60749 519 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 RETP07949 1114 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 COL6A2P12110 1019 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 IDSP22304 550 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 ACADLP28330 430 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 SLC26A3P40879 764 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 GLRBP48167 497 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 PLOD1Q02809 727 aaPredicted RBP13.87□□□□□ -0.19
RNF4-208ENST00000507247 CLCA4Q14CN2 919 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 CAPRIN2Q6IMN6 1127 aaKnown RBP13.87□□□□□ -0.19
RNF4-208ENST00000507247 NEK10Q6ZWH5 1172 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 PDZD3Q86UT5 571 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 RASGRP3Q8IV61 690 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 SFTPA2Q8IWL1 248 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 MYO1HQ8N1T3 1032 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 FSTL5Q8N475 847 aaPredicted RBP13.87□□□□□ -0.19
RNF4-208ENST00000507247 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 PDLIM5Q96HC4 596 aaKnown RBP13.87□□□□□ -0.19
RNF4-208ENST00000507247 APOPT1Q96IL0 206 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 SMC6Q96SB8 1091 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 NUSAP1Q9BXS6 441 aaKnown RBP13.87□□□□□ -0.19
RNF4-208ENST00000507247 ZDHHC5Q9C0B5 715 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 C12orf65Q9H3J6 166 aaKnown RBP13.87□□□□□ -0.19
RNF4-208ENST00000507247 GAREM1Q9H706 876 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 MKS1Q9NXB0 559 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 TAAR2Q9P1P5 351 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms