RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SLC24A2Q9UI40 661 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 CDYLQ9Y232 598 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 MAD1L1Q9Y6D9 718 aa17.4■□□□□ 0.38
SMN1-204ENST00000506163 CAPN5O15484 640 aaPredicted RBP17.39■□□□□ 0.38
SMN1-204ENST00000506163 RAD51CO43502 376 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 KIF1CO43896 1103 aaKnown RBP17.39■□□□□ 0.38
SMN1-204ENST00000506163 SEC31AO94979 1220 aaKnown RBP17.39■□□□□ 0.38
SMN1-204ENST00000506163 C9P02748 559 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 FTH1P02794 183 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 GSTM1P09488 218 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 FGF3P11487 239 aaPredicted RBP17.39■□□□□ 0.38
SMN1-204ENST00000506163 AMD1P17707 334 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 RPL21P46778 160 aaKnown RBP17.39■□□□□ 0.38
SMN1-204ENST00000506163 ITGA8P53708 1063 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 CSE1LP55060 971 aaKnown RBP17.39■□□□□ 0.38
SMN1-204ENST00000506163 GSTM4Q03013 218 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 RPA4Q13156 261 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 EIF3IQ13347 325 aaKnown RBP17.39■□□□□ 0.38
SMN1-204ENST00000506163 TRA2AQ13595 282 aaKnown RBP eCLIP17.39■□□□□ 0.38
SMN1-204ENST00000506163 MORF4L2Q15014 288 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 PCGF5Q86SE9 256 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 LPGAT1Q92604 370 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 PMEPA1Q969W9 287 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 STAMBPL1Q96FJ0 436 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 CMKLR1Q99788 373 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 CARD6Q9BX69 1037 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 EPB41L1Q9H4G0 881 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 KIR3DX1Q9H7L2 352 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 OCIAD1Q9NX40 245 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 PISDQ9UG56 409 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 SNX24Q9Y343 169 aa17.39■□□□□ 0.38
SMN1-204ENST00000506163 MN1Q10571 1320 aaPredicted RBP17.39■□□□□ 0.37
SMN1-204ENST00000506163 QSOX1O00391 747 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 LIN7AO14910 233 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 HGSO14964 777 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 NDUFS3O75489 264 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 USP1O94782 785 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 S1PR4O95977 384 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 TPBGLP0DKB5 382 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 RPS3P23396 243 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMN1-204ENST00000506163 AOAHP28039 575 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 CAPZBP47756 277 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 CD151P48509 253 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 PPM1FP49593 454 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 ERVPABLB-1P60509 514 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 BOP1Q14137 746 aaKnown RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 HP1BP3Q5SSJ5 553 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 ZNF572Q7Z3I7 529 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 PDZD3Q86UT5 571 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 CILP2Q8IUL8 1156 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 DENND6AQ8IWF6 608 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 LSMEM2Q8N112 164 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 SNIP1Q8TAD8 396 aaKnown RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 ZNF578Q96N58 590 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 EBNA1BP2Q99848 306 aaKnown RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 FAM169AQ9Y6X4 670 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 EFCAB8A8MWE9 144 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 GPC4O75487 556 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 ITGA2BP08514 1039 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 RBMS1P29558 406 aaKnown RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 FMO4P31512 558 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 PPARGP37231 505 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 EIF2S3P41091 472 aaKnown RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 EIF3BP55884 814 aaKnown RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 CTBP1Q13363 440 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 BBS9Q3SYG4 887 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 MRNIPQ6NTE8 343 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 CLEC14AQ86T13 490 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 OTUD6BQ8N6M0 293 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 BMPERQ8N8U9 685 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 ZFPM2Q8WW38 1151 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 TFGQ92734 400 aaPredicted RBP17.38■□□□□ 0.37
SMN1-204ENST00000506163 TMEM159Q96B96 161 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 SNF8Q96H20 258 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 C9orf72Q96LT7 481 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 TGM7Q96PF1 710 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 FERD3LQ96RJ6 166 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 GALPQ9UBC7 116 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 EPHA6Q9UF33 1036 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 CRYL1Q9Y2S2 319 aa17.38■□□□□ 0.37
SMN1-204ENST00000506163 CFAP47Q6ZTR5 3102 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 C9orf172C9J069 976 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 JMJD7P0C870 316 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 PAMP19021 973 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 OGNP20774 298 aaKnown RBP17.37■□□□□ 0.37
SMN1-204ENST00000506163 SLC5A2P31639 672 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 PRKG2Q13237 762 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 CRYMQ14894 314 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 TRADDQ15628 312 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 ZNF470Q6ECI4 717 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 SDCCAG8Q86SQ7 713 aaPredicted RBP17.37■□□□□ 0.37
SMN1-204ENST00000506163 PLXDC1Q8IUK5 500 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 AGBL5Q8NDL9 886 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 OR4E2Q8NGC2 313 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 OR5AR1Q8NGP9 310 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 USP7Q93009 1102 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 PPM1MQ96MI6 270 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 TCF12Q99081 682 aa17.37■□□□□ 0.37
SMN1-204ENST00000506163 C20orf96Q9NUD7 363 aaPredicted RBP17.37■□□□□ 0.37
SMN1-204ENST00000506163 FOXJ2Q9P0K8 574 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms