RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 OVCH1Q7RTY7 1134 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 IRF2BP2Q7Z5L9 587 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ADGRG3Q86Y34 549 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PHF13Q86YI8 300 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CAMK1DQ8IU85 385 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CPNE9Q8IYJ1 553 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SMYD4Q8IYR2 804 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SIX6OS1Q8N1H7 587 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 C7orf31Q8N865 590 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 C12orf29Q8N999 325 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 FANCBQ8NB91 859 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 OR6Y1Q8NGX8 325 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 DDI1Q8WTU0 396 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 KBTBD7Q8WVZ9 684 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 KLHL29Q96CT2 875 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 FAM71F1Q96KD3 344 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CCDC77Q9BR77 488 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 C2orf88Q9BSF0 95 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 LSM14BQ9BX40 385 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SEMA4CQ9C0C4 833 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 AZI2Q9H6S1 392 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 LRRC4Q9HBW1 653 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 MAGEE1Q9HCI5 957 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 EPB41L5Q9HCM4 733 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 GSN-AS1Q9NRJ2 163 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 TAS2R1Q9NYW7 299 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 GMPR2Q9P2T1 348 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 VPS28Q9UK41 221 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 FAF1Q9UNN5 650 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 KCNJ14Q9UNX9 436 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SLC22A7Q9Y694 548 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 A0A0U1RQF3 1178 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 TCRBV5S1A1TA0A578 114 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PTGES3LE9PB15 166 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 DNASE2O00115 360 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 E2F3O00716 465 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 TSPAN4O14817 238 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 IPO13O94829 963 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 HAUS5O94927 633 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 BCL10O95999 233 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 F11P03951 625 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 DHRS4L1P0CG22 281 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 MARK3P27448 753 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CST5P28325 142 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PHBP35232 272 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 GRIA3P42263 894 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 BAG6P46379 1132 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CDH8P55286 799 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 EIF3BP55884 814 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 HSD11B2P80365 405 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SEMG2Q02383 582 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 DSG1Q02413 1049 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 BST2Q10589 180 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 LRRC14Q15048 493 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ETFDHQ16134 617 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 OGFOD2Q6N063 350 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CD300LGQ6UXG3 332 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ZYG11AQ6WRX3 759 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CXorf67Q86X51 503 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PYROXD2Q8N2H3 581 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 TMEM102Q8N9M5 508 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 LMO3Q8TAP4 145 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 LRRC8CQ8TDW0 803 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 RUFY2Q8WXA3 655 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 KRT35Q92764 455 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 TAMM41Q96BW9 452 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ISOC1Q96CN7 298 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 DNAJC19Q96DA6 116 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ZNF837Q96EG3 531 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CCDC43Q96MW1 224 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CSF3RQ99062 836 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PCYT2Q99447 389 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SEC22CQ9BRL7 303 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 GPR61Q9BZJ8 451 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 DNAI2Q9GZS0 605 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CTDSP1Q9GZU7 261 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ABHD10Q9NUJ1 306 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 FBXL12Q9NXK8 326 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 KLQ9UEF7 1012 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PCYOX1Q9UHG3 505 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ADAMTS6Q9UKP5 1117 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 TCFL5Q9UL49 500 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 WBP11Q9Y2W2 641 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CDY1Q9Y6F8 540 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 HELZP42694 1942 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 LOC100289279A0A1B0GTE1 492 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SLC15A5A6NIM6 579 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 A8MXE2 369 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 AHRRA9YTQ3 701 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PEX12O00623 359 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PPP6CO00743 305 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 SLC30A4O14863 429 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ULK1O75385 1050 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 PSMD10O75832 226 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 MMP1P03956 469 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 ATP5BP06576 529 aaKnown RBP2.24□□□□□ -2.05
NEDD4-205ENST00000506154 HEXBP07686 556 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 FAM157BP0CG42 384 aa2.24□□□□□ -2.05
NEDD4-205ENST00000506154 CMA1P23946 247 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms