RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 GBA3Q9H227 469 aa11.07□□□□□ -0.64
SIL1-208ENST00000505945 FAM96AQ9H5X1 160 aa11.07□□□□□ -0.64
SIL1-208ENST00000505945 ACSS2Q9NR19 701 aa11.07□□□□□ -0.64
SIL1-208ENST00000505945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
SIL1-208ENST00000505945 COLEC10Q9Y6Z7 277 aa11.07□□□□□ -0.64
SIL1-208ENST00000505945 TEX15Q9BXT5 2789 aa11.07□□□□□ -0.64
SIL1-208ENST00000505945 SPENQ96T58 3664 aaKnown RBP11.06□□□□□ -0.64
SIL1-208ENST00000505945 CCDC66A2RUB6 948 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 KLHL33A6NCF5 533 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 AGAP14A8MT82 685 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 APOC4-APOC2K7ER74 178 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 MEN1O00255 615 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CCL22O00626 93 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 VPS4BO75351 444 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 APOC2P02655 101 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CDH3P22223 829 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 GNLYP22749 145 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 ADRA1AP35348 466 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 PTGIRP43119 386 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 UQCRFS1P47985 274 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 PGDP52209 483 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 ABRQ12979 859 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 PRKAA1Q13131 559 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 TBX2Q13207 712 aaPredicted RBP11.06□□□□□ -0.64
SIL1-208ENST00000505945 MSLNQ13421 630 aaPredicted RBP11.06□□□□□ -0.64
SIL1-208ENST00000505945 NADK2Q4G0N4 442 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 PLEKHS1Q5SXH7 462 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CCDC181Q5TID7 509 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 IZUMO3Q5VZ72 239 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 ITPRIPL1Q6GPH6 555 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CARFQ8N187 725 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 RNF214Q8ND24 703 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 PHC3Q8NDX5 983 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 OR13C4Q8NGS5 318 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 OR8K5Q8NH50 307 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 LCN9Q8WX39 176 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CPT1BQ92523 772 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CLIP3Q96DZ5 547 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 RBM41Q96IZ5 413 aaKnown RBP11.06□□□□□ -0.64
SIL1-208ENST00000505945 LINC00615Q96LM1 132 aaPredicted RBP11.06□□□□□ -0.64
SIL1-208ENST00000505945 FERD3LQ96RJ6 166 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CCM2Q9BSQ5 444 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 LRRC4CQ9HCJ2 640 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 MLXIPLQ9NP71 852 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 C1GALT1Q9NS00 363 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 CRLS1Q9UJA2 301 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 POMT2Q9UKY4 750 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 VPS4AQ9UN37 437 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 BTRCQ9Y297 605 aa11.06□□□□□ -0.64
SIL1-208ENST00000505945 AAR2Q9Y312 384 aaKnown RBP11.06□□□□□ -0.64
SIL1-208ENST00000505945 GSAPA4D1B5 854 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 CRTAMO95727 393 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 PYGMP11217 842 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 RALBP11234 206 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 ATP1B2P14415 290 aaPredicted RBP11.05□□□□□ -0.64
SIL1-208ENST00000505945 PSMB4P28070 264 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 NDUFS1P28331 727 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 PRDX3P30048 256 aaKnown RBP11.05□□□□□ -0.64
SIL1-208ENST00000505945 PREPP48147 710 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 GSDMDP57764 484 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 OTUD4Q01804 1114 aaKnown RBP11.05□□□□□ -0.64
SIL1-208ENST00000505945 SPARCL1Q14515 664 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 ANKRD20A2Q5SQ80 823 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 ANKRD20A1Q5TYW2 823 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 ANKRD20A3Q5VUR7 823 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 MICALCLQ6ZW33 695 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 DSELQ8IZU8 1212 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 NXPE1Q8N323 547 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 ENDOVQ8N8Q3 282 aaKnown RBP11.05□□□□□ -0.64
SIL1-208ENST00000505945 ACVR1CQ8NER5 493 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 OR1L3Q8NH93 324 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 ACTL9Q8TC94 416 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 CPT1CQ8TCG5 803 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 ADAMTS17Q8TE56 1095 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 LRFN5Q96NI6 719 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 COPS8Q99627 209 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 FAM118BQ9BPY3 351 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 KLHL25Q9H0H3 589 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 SRMSQ9H3Y6 488 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 FANCEQ9HB96 536 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 LATS2Q9NRM7 1088 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 TCFL5Q9UL49 500 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 SNX7Q9UNH6 387 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 PCDHGA9Q9Y5G4 932 aaKnown RBP11.05□□□□□ -0.64
SIL1-208ENST00000505945 PCDHA13Q9Y5I0 950 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 HEBP2Q9Y5Z4 205 aa11.05□□□□□ -0.64
SIL1-208ENST00000505945 C17orf113A0A1B0GUU1 675 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 TMEM150CB9EJG8 249 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 BTN3A3O00478 584 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 KCNN4O15554 427 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 TMEM63AO94886 807 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 CAPN1P07384 714 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 RAB40ALP0C0E4 278 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 RBP3P10745 1247 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 PVRP15151 417 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 ST6GAL1P15907 406 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 ITGALP20701 1170 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms