RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TSR3Q9UJK0 312 aaKnown RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 COL27A1Q8IZC6 1860 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 A0A1W2PQM1 296 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 FAM149AA5PLN7 773 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 B4GAT1O43505 415 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 HYAL3O43820 417 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 RPLP0P05388 317 aaKnown RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 MTHFD1P11586 935 aaKnown RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 SPINK2P20155 84 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 KYNUQ16719 465 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 RBM20Q5T481 1227 aaKnown RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 HES3Q5TGS1 186 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 OTOAQ7RTW8 1153 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 GABPB2Q8TAK5 448 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 TMEM159Q96B96 161 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 SLC30A3Q99726 388 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 CCDC68Q9H2F9 335 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 STN1Q9H668 368 aaKnown RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 ATXN7L1Q9ULK2 861 aaPredicted RBP16.12■□□□□ 0.17
SCLT1-205ENST00000503401 CDYLQ9Y232 598 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 MED16Q9Y2X0 877 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 FRYQ5TBA9 3013 aa16.12■□□□□ 0.17
SCLT1-205ENST00000503401 FREM2Q5SZK8 3169 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 E5RI56 91 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 H3BMM5 538 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 GPC4O75487 556 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 SLU7O95391 586 aaKnown RBP16.11■□□□□ 0.17
SCLT1-205ENST00000503401 APOA4P06727 396 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 PNLIPP16233 465 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 MAPK9P45984 424 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 PPM1FP49593 454 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-205ENST00000503401 E2F1Q01094 437 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 RPA4Q13156 261 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 GPR18Q14330 331 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 ZNF449Q6P9G9 518 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 KIAA0408Q6ZU52 694 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 RAB44Q7Z6P3 723 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-205ENST00000503401 SIDT2Q8NBJ9 832 aaKnown RBP16.11■□□□□ 0.17
SCLT1-205ENST00000503401 PHC3Q8NDX5 983 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 FBF1Q8TES7 1133 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 ASZ1Q8WWH4 475 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 AARSD1Q9BTE6 412 aaKnown RBP16.11■□□□□ 0.17
SCLT1-205ENST00000503401 LRRN3Q9H3W5 708 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 SLC40A1Q9NP59 571 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 POT1Q9NUX5 634 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 KCNK4Q9NYG8 393 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 NINJ2Q9NZG7 142 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCLT1-205ENST00000503401 V9GYY5 206 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-205ENST00000503401 KIF26BQ2KJY2 2108 aa16.11■□□□□ 0.17
SCLT1-205ENST00000503401 MED19A0JLT2 244 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-205ENST00000503401 IFRD1O00458 451 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-205ENST00000503401 C1QAP02745 245 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 CD151P48509 253 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 PGGT1BP53609 377 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 NR1D2Q14995 579 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 EFTUD2Q15029 972 aaKnown RBP eCLIP16.1■□□□□ 0.17
SCLT1-205ENST00000503401 TMEM26Q6ZUK4 368 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 USP53Q70EK8 1073 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 STRA8Q7Z7C7 330 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 PDZD3Q86UT5 571 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 GIMAP7Q8NHV1 300 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 GPR21Q99679 349 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 CDC42EP4Q9H3Q1 356 aaKnown RBP16.1■□□□□ 0.17
SCLT1-205ENST00000503401 ANKZF1Q9H8Y5 726 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 RDH14Q9HBH5 336 aa16.1■□□□□ 0.17
SCLT1-205ENST00000503401 RUVBL2Q9Y230 463 aaKnown RBP16.1■□□□□ 0.17
SCLT1-205ENST00000503401 IGHV1OR21-1A0A087WYE8 117 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 ACSL3O95573 720 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 ADRB1P08588 477 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 GSTA2P09210 222 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 FAM153BP0C7A2 387 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 MYBL2P10244 700 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 ACADLP28330 430 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 GPR3P46089 330 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 CLCN7P51798 805 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 CDKN2DP55273 166 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 ABRQ12979 859 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 TMED2Q15363 201 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 KBTBD12Q3ZCT8 623 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 FAM153CQ494X1 144 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 TMPRSS9Q7Z410 1059 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 PIM3Q86V86 326 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 SLC22A15Q8IZD6 547 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 ZBTB2Q8N680 514 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 GPATCH11Q8N954 259 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 CFAP61Q8NHU2 1237 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 TFGQ92734 400 aaPredicted RBP16.09■□□□□ 0.17
SCLT1-205ENST00000503401 FERD3LQ96RJ6 166 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 NRTNQ99748 197 aa16.09■□□□□ 0.17
SCLT1-205ENST00000503401 FAM159BA6NKW6 160 aa16.08■□□□□ 0.17
SCLT1-205ENST00000503401 NTN3O00634 580 aaPredicted RBP16.08■□□□□ 0.17
SCLT1-205ENST00000503401 SLCO2B1O94956 709 aa16.08■□□□□ 0.17
SCLT1-205ENST00000503401 CDK4P11802 303 aa16.08■□□□□ 0.17
SCLT1-205ENST00000503401 TYRP1P17643 537 aa16.08■□□□□ 0.17
SCLT1-205ENST00000503401 CD1CP29017 333 aa16.08■□□□□ 0.17
SCLT1-205ENST00000503401 TIAL1Q01085 375 aaKnown RBP eCLIP16.08■□□□□ 0.17
SCLT1-205ENST00000503401 PRKG2Q13237 762 aa16.08■□□□□ 0.17
SCLT1-205ENST00000503401 SPIDRQ14159 915 aa16.08■□□□□ 0.17
SCLT1-205ENST00000503401 KRT33BQ14525 404 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms