RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SLC32A1Q9H598 525 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 AHSPQ9NZD4 102 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 TMEM181Q9P2C4 612 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 ENOPH1Q9UHY7 261 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 PCDHGB4Q9UN71 923 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 NPEPPSL1A6NEC2 478 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 A6NHS1 94 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 AP1G1O43747 822 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 SEC24DO94855 1032 aaPredicted RBP7.29□□□□□ -1.24
PDGFC-203ENST00000502773 IFNA14P01570 189 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 FGBP02675 491 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 SLC2A4P14672 509 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 PRKACBP22694 351 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 HALP42357 657 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 HNRNPFP52597 415 aaKnown RBP7.29□□□□□ -1.24
PDGFC-203ENST00000502773 NME5P56597 212 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 TUBA4AP68366 448 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 LRP8Q14114 963 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 ANXA8L1Q5VT79 327 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 TTC23Q5W5X9 447 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 LCN8Q6JVE9 175 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 GK5Q6ZS86 529 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 ZNF555Q8NEP9 628 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 MAPK15Q8TD08 544 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 SLC22A17Q8WUG5 538 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 LRRC58Q96CX6 371 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 MAGED4Q96JG8 741 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 CLPTM1LQ96KA5 538 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 NPAS2Q99743 824 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 DCUN1D5Q9BTE7 237 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 BRINP2Q9C0B6 783 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 EPB41L1Q9H4G0 881 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 IPPKQ9H8X2 491 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 ARL15Q9NXU5 204 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 MARCH4Q9P2E8 410 aaPredicted RBP7.29□□□□□ -1.24
PDGFC-203ENST00000502773 LHX3Q9UBR4 397 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.29□□□□□ -1.24
PDGFC-203ENST00000502773 ADGRE2Q9UHX3 823 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 TSC2P49815 1807 aa7.29□□□□□ -1.24
PDGFC-203ENST00000502773 SNTNA6NMZ2 147 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 SGTAO43765 313 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 FKBP9O95302 570 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 C8AP07357 584 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 TCF3P15923 654 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 CDH3P22223 829 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 HNF4AP41235 474 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 SLC7A2P52569 658 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 THOP1P52888 689 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ECT2LQ008S8 904 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 OCA2Q04671 838 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 SRSF11Q05519 484 aaKnown RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 PWP1Q13610 501 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 NR1D2Q14995 579 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 EID3Q8N140 333 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 SVOPLQ8N434 492 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 DPP10Q8N608 796 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ANKFN1Q8N957 763 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 DGCR14Q96DF8 476 aaKnown RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 CLIP3Q96DZ5 547 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 RNF145Q96MT1 663 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 NTMT1Q9BV86 223 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 CD244Q9BZW8 370 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 HEBP1Q9NRV9 189 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 DNAJC11Q9NVH1 559 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 C1orf109Q9NX04 203 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ATPIF1Q9UII2 106 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 PCTPQ9UKL6 214 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ST14Q9Y5Y6 855 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 WISP3O95389 354 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 PABPC1P11940 636 aaKnown RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 CXCR2P25025 360 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 VIPR1P32241 457 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 S100A3P33764 101 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 IST1P53990 364 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ATN1P54259 1190 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 RAD23AP54725 363 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 TRAF2Q12933 501 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 MAPKAPK3Q16644 382 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 B3GNT6Q6ZMB0 384 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 TPGS1Q6ZTW0 290 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ADHFE1Q8IWW8 467 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 SPATA6LQ8N4H0 392 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ST13P5Q8NFI4 369 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 MARK4Q96L34 752 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 FAM83DQ9H4H8 585 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 COPS7BQ9H9Q2 264 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 IL23AQ9NPF7 189 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 GKN1Q9NS71 199 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 CCM2LQ9NUG4 571 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 EVLQ9UI08 416 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 RPS6KA6Q9UK32 745 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 AURKCQ9UQB9 309 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 HS3ST2Q9Y278 367 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 PPIL1Q9Y3C6 166 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 DNAJC15Q9Y5T4 150 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 H3BNC9 293 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 FZD6O60353 706 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ZMPSTE24O75844 475 aa7.28□□□□□ -1.24
PDGFC-203ENST00000502773 RSL1D1O76021 490 aaKnown RBP7.28□□□□□ -1.24
PDGFC-203ENST00000502773 ALBP02768 609 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms