RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 COASYQ13057 564 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 OLIG2Q13516 323 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 SF3B4Q15427 424 aaKnown RBP eCLIP4.76□□□□□ -1.65
SSR3-209ENST00000498205 CCNG2Q16589 344 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 USP41Q3LFD5 358 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 CENPPQ6IPU0 288 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 TTI2Q6NXR4 508 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 CCNI2Q6ZMN8 369 aaPredicted RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 ZNF771Q7L3S4 317 aaPredicted RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 ARMC9Q7Z3E5 817 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 NOXA1Q86UR1 476 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 HEATR4Q86WZ0 1026 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 SLC35F3Q8IY50 421 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 GUF1Q8N442 669 aaKnown RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 SRBD1Q8N5C6 995 aaKnown RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 TRIM58Q8NG06 486 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 LMO3Q8TAP4 145 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 CREB3L4Q8TEY5 395 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 RFFLQ8WZ73 363 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 ZUFSPQ96AP4 578 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 DHX58Q96C10 678 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 SCMH1Q96GD3 660 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 EPSTI1Q96J88 318 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 RAB34Q9BZG1 259 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 FAM107BQ9H098 131 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 GAREM1Q9H706 876 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 ANKZF1Q9H8Y5 726 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 DDX4Q9NQI0 724 aaKnown RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 CNGB3Q9NQW8 809 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 ZNF224Q9NZL3 707 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 VPS54Q9P1Q0 977 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 CTNNAL1Q9UBT7 734 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 NARFQ9UHQ1 456 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 SIX4Q9UIU6 781 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 TTC7AQ9ULT0 858 aaPredicted RBP4.76□□□□□ -1.65
SSR3-209ENST00000498205 NIP7Q9Y221 180 aaKnown RBP eCLIP4.76□□□□□ -1.65
SSR3-209ENST00000498205 JRKLQ9Y4A0 524 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 SNX9Q9Y5X1 595 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 ATAD5Q96QE3 1844 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 MYH1P12882 1939 aa4.76□□□□□ -1.65
SSR3-209ENST00000498205 FOCADQ5VW36 1801 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 A0A087WWV3 80 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 SAA2-SAA4A0A096LPE2 208 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 A0A1W2PRG0 241 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 BTNL10A8MVZ5 291 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 PLRG1O43660 514 aaKnown RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 LDB3O75112 727 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 GNA14O95837 355 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 EPB41P11171 864 aaKnown RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 TCP1P17987 556 aaKnown RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 PSMA4P25789 261 aaKnown RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 ELF1P32519 619 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 ACTN2P35609 894 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 UBA7P41226 1012 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 NLRP5P59047 1200 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 DDR1Q08345 913 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 DRAP1Q14919 205 aaPredicted RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 EFNB3Q15768 340 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 CTF1Q16619 201 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 HSP90B2PQ58FF3 399 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 HYIQ5T013 277 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 CDC73Q6P1J9 531 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 EMBQ6PCB8 327 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 KCTD18Q6PI47 426 aaPredicted RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 MOXD1Q6UVY6 613 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 UNQ6126/PRO20091Q6UXV3 157 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 GBP6Q6ZN66 633 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 ADGRA1Q86SQ6 560 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 TDRPQ86YL5 185 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 ZC3H3Q8IXZ2 948 aaKnown RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 MMGT1Q8N4V1 131 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 PDILTQ8N807 584 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 NELFBQ8WX92 580 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 HARBI1Q96MB7 349 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 LBHD1Q9BQE6 289 aaPredicted RBP4.75□□□□□ -1.65
SSR3-209ENST00000498205 TRIM9Q9C026 710 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 SLC25A18Q9H1K4 315 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 KAT14Q9H8E8 782 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 ZNF556Q9HAH1 456 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 EXOC1Q9NV70 894 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 FBXL5Q9UKA1 691 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 VDAC3Q9Y277 283 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 SAR1BQ9Y6B6 198 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 MYH8P13535 1937 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 NOTCH4Q99466 2003 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 NAV1Q8NEY1 1877 aa4.75□□□□□ -1.65
SSR3-209ENST00000498205 GAKO14976 1311 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 FLT1P17948 1338 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 BAZ2BQ9UIF8 2168 aaKnown RBP4.74□□□□□ -1.65
SSR3-209ENST00000498205 NHSQ6T4R5 1651 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 GPR75-ASB3A0A0A6YYF3 556 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 A0A1W2PPH5 198 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 TTC26A0AVF1 554 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 USO1O60763 962 aaKnown RBP4.74□□□□□ -1.65
SSR3-209ENST00000498205 SHOX2O60902 331 aaPredicted RBP4.74□□□□□ -1.65
SSR3-209ENST00000498205 NDUFS7O75251 213 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 GFPT2O94808 682 aa4.74□□□□□ -1.65
SSR3-209ENST00000498205 PLEKHA8P1O95397 391 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms