RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 ITPKBP27987 946 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 PBLDP30039 288 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 ETV5P41161 510 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 TRA2AQ13595 282 aaKnown RBP eCLIP15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 LAMB3Q13751 1172 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 RPE65Q16518 533 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 DNAJC21Q5F1R6 531 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 FOXR1Q6PIV2 292 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 C19orf48Q6RUI8 117 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 TAS2R42Q7RTR8 314 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 CCDC25Q86WR0 208 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 LILRA3Q8N6C8 439 aaPredicted RBP15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 CLDN19Q8N6F1 224 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 RCBTB1Q8NDN9 531 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 PEX13Q92968 403 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 LRRC39Q96DD0 335 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 SGSM3Q96HU1 749 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 DCBLD2Q96PD2 775 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 CMKLR1Q99788 373 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 XAB2Q9HCS7 855 aaKnown RBP15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 POT1Q9NUX5 634 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 PSMD13Q9UNM6 376 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 TCAF1Q9Y4C2 921 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 PCDHGA7Q9Y5G6 932 aa15.63■□□□□ 0.09
CTDSP1-214ENST00000497677 C17orf113A0A1B0GUU1 675 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 KLHL33A6NCF5 533 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 CFAP99D6REC4 459 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 E7ESA3 106 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 AGRPO00253 132 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 HGSO14964 777 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 DUX1O43812 170 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 GOT2P00505 430 aaKnown RBP15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 ABHD2P08910 425 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 RALBP11234 206 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 MLNP12872 115 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 CCL4P13236 92 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 SESN2P58004 480 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 CRADDP78560 199 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 PCID2Q5JVF3 399 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 NLRP9Q7RTR0 991 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 ARHGAP22Q7Z5H3 698 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 NCSTNQ92542 709 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 AHCYL2Q96HN2 611 aaKnown RBP15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 INSM2Q96T92 566 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 CCDC77Q9BR77 488 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 EPB41L1Q9H4G0 881 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 PPCSQ9HAB8 311 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 CHRAC1Q9NRG0 131 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 TREX1Q9NSU2 369 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 PISDQ9UG56 409 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 ACSL5Q9ULC5 683 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 PLAAQ9Y263 795 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 PRSS21Q9Y6M0 314 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 KIF26BQ2KJY2 2108 aa15.62■□□□□ 0.09
CTDSP1-214ENST00000497677 GOLGA8KD6RF30 607 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 NVLO15381 856 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 RIPK2O43353 540 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 SPAG6O75602 509 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 C9P02748 559 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 JMJD7P0C870 316 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 FGF3P11487 239 aaPredicted RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 SLC5A2P31639 672 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 HALP42357 657 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 MAGEA4P43358 317 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 NPY2RP49146 381 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 PCBP4P57723 403 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 IFFO1Q0D2I5 559 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 GPR18Q14330 331 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 ITIH4Q14624 930 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 UAP1Q16222 522 aaPredicted RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 CAPRIN2Q6IMN6 1127 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 LRRC8BQ6P9F7 803 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 PACS1Q6VY07 963 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 TRIM48Q8IWZ4 208 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 RBM12BQ8IXT5 1001 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 CFAP206Q8IYR0 622 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 CNPY4Q8N129 248 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 ZNF248Q8NDW4 579 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 GPR150Q8NGU9 434 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 HM13Q8TCT9 377 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 CXorf40BQ96DE9 158 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 ZIM3Q96PE6 472 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 SH3GL2Q99962 352 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 CCM2Q9BSQ5 444 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 TMEM109Q9BVC6 243 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 ROPN1BQ9BZX4 212 aaPredicted RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 WWP1Q9H0M0 922 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 CDC42EP4Q9H3Q1 356 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 ROPN1Q9HAT0 212 aaPredicted RBP15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 ACSL6Q9UKU0 697 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
CTDSP1-214ENST00000497677 RRP8O43159 456 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-214ENST00000497677 UBXN7O94888 489 aa15.6■□□□□ 0.09
CTDSP1-214ENST00000497677 AP2A2O94973 939 aa15.6■□□□□ 0.09
CTDSP1-214ENST00000497677 POLBP06746 335 aa15.6■□□□□ 0.09
CTDSP1-214ENST00000497677 GSTA2P09210 222 aa15.6■□□□□ 0.09
CTDSP1-214ENST00000497677 MTHFD1P11586 935 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-214ENST00000497677 PHBP35232 272 aa15.6■□□□□ 0.09
CTDSP1-214ENST00000497677 NSG1P42857 185 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms