RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TRIM73Q86UV7 250 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 RFX6Q8HWS3 928 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 GALNT16Q8N428 558 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM185AQ8NFB2 350 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 EXD1Q8NHP7 514 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 MYCBPAPQ8TBZ2 947 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 UBLCP1Q8WVY7 318 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-224ENST00000497488 CELF1Q92879 486 aaKnown RBP5.96□□□□□ -1.46
BRCA1-224ENST00000497488 SMC6Q96SB8 1091 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 FEVQ99581 238 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 CPNE1Q99829 537 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 ASCL2Q99929 193 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 ZSCAN5AQ9BUG6 496 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 EDEM2Q9BV94 578 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 RMND5AQ9H871 391 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 CRLF2Q9HC73 371 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 GLRX2Q9NS18 164 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM74BQ9NUR3 256 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 EXOC6BQ9Y2D4 811 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 HEMK1Q9Y5R4 338 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-224ENST00000497488 ADGRA2Q96PE1 1338 aa5.96□□□□□ -1.46
BRCA1-224ENST00000497488 KIF15Q9NS87 1388 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 FAM230AA0A1W2PPH8 454 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 TRIM49BA6NDI0 452 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM8BA6NDV4 472 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 MARCH11A6NNE9 402 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 KBTBD13C9JR72 458 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 PLK4O00444 970 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 VCYO14598 125 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 PPIP5K2O43314 1243 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 B4GALT4O60513 344 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ATG13O75143 517 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ADAMTS4O75173 837 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 IDH1O75874 414 aaKnown RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 EPN2O95208 641 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 CXCL10P02778 98 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 PGK2P07205 417 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ASGR1P07306 291 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 RAB40ALP0C0E4 278 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 APEHP13798 732 aaKnown RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 FPR3P25089 353 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 PTPN4P29074 926 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 CXCR3P49682 368 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 CLCN5P51795 746 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 FOLH1Q04609 750 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 DMTNQ08495 405 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ABRQ12979 859 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 TSTA3Q13630 321 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ANXA2RQ3ZCQ2 193 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SPOUT1Q5T280 376 aaKnown RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ERICH6BQ5W0A0 696 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 CES5AQ6NT32 575 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ENPP7Q6UWV6 458 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 CES3Q6UWW8 571 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ARSKQ6UWY0 536 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 PQLC2Q6ZP29 291 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 HTR3DQ70Z44 454 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 TRILQ7L0X0 811 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 AQP12AQ8IXF9 295 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF679Q8IYX0 411 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 Q8N3U1 123 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 RASGEF1AQ8N9B8 481 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 CCDC148Q8NFR7 591 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 OR13C2Q8NGS9 318 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 WDR20Q8TBZ3 569 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SLC9A6Q92581 669 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 PIGKQ92643 395 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ATOH1Q92858 354 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SNAPC3Q92966 411 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SPDL1Q96EA4 605 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SGF29Q96ES7 293 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 EPSTI1Q96J88 318 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SPATA33Q96N06 139 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SEPHS2Q99611 448 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 PCGF1Q9BSM1 259 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 SGPP1Q9BX95 441 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ALOXE3Q9BYJ1 711 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 MCOLN1Q9GZU1 580 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 DDX47Q9H0S4 455 aaKnown RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 WNT5BQ9H1J7 359 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 WDR6Q9NNW5 1121 aaKnown RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 RBM28Q9NW13 759 aaKnown RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 CNTLNQ9NXG0 1405 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 RAI14Q9P0K7 980 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 TBC1D7Q9P0N9 293 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 GPR132Q9UNW8 380 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 ERVK-11Q9UQG0 969 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 NOX1Q9Y5S8 564 aa5.95□□□□□ -1.46
BRCA1-224ENST00000497488 RNF17Q9BXT8 1623 aaKnown RBP5.95□□□□□ -1.46
BRCA1-224ENST00000497488 MROH2AA6NES4 1674 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 KDM5DQ9BY66 1539 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 DUOX2Q9NRD8 1548 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 ARPC4-TTLL3A0A0A6YYG9 625 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 KANSL1LA0AUZ9 987 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 FEZF1A0PJY2 475 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 LRRIQ4A6NIV6 560 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 TEX28O15482 410 aa5.94□□□□□ -1.46
BRCA1-224ENST00000497488 AP5Z1O43299 807 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms