RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 GNB1P62873 340 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 PPIGQ13427 754 aaKnown RBP eCLIP3.45□□□□□ -1.861e-11■■□□□ 13.1
CD46-218ENST00000496723 MELKQ14680 651 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 FCN2Q15485 313 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 ITPRIPL1Q6GPH6 555 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 FAM53AQ6NSI3 398 aaPredicted RBP3.45□□□□□ -1.86
CD46-218ENST00000496723 MFSD6Q6ZSS7 791 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 RPAP2Q8IXW5 612 aaPredicted RBP3.45□□□□□ -1.86
CD46-218ENST00000496723 ZNF248Q8NDW4 579 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 ERLEC1Q96DZ1 483 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 MTERF3Q96E29 417 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 SLC47A1Q96FL8 570 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 PPIL3Q9H2H8 161 aaKnown RBP3.45□□□□□ -1.86
CD46-218ENST00000496723 LARSQ9P2J5 1176 aaKnown RBP3.45□□□□□ -1.86
CD46-218ENST00000496723 HACL1Q9UJ83 578 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 KCNK7Q9Y2U2 307 aa3.45□□□□□ -1.86
CD46-218ENST00000496723 ASTN2O75129 1339 aaPredicted RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 RSF1Q96T23 1441 aaPredicted RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 MED19A0JLT2 244 aaPredicted RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 OR2A25A4D2G3 310 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 MAGEB17A8MXT2 336 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 SLC22A2O15244 555 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 PAPSS1O43252 624 aaPredicted RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 SSX4O60224 188 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 CSPG5O95196 566 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 ZWINTO95229 277 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 GNB3P16520 340 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 MAP2K2P36507 400 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 PNLIPRP2P54317 469 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 ERVK11-1P61568 191 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 CXCL9Q07325 125 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 KIAA1644Q3SXP7 199 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 SH2D5Q6ZV89 423 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 ISCA2Q86U28 154 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 DNAJC22Q8N4W6 341 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 POC5Q8NA72 575 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 DBF4BQ8NFT6 615 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 WDR20Q8TBZ3 569 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 ZFAND2BQ8WV99 257 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 TMEM190Q8WZ59 177 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 TMEM143Q96AN5 459 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 LRR1Q96L50 414 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 OR6C1Q96RD1 312 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 PAFAH2Q99487 392 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 TRAF4Q9BUZ4 470 aaPredicted RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 ABHD6Q9BV23 337 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 MOV10L1Q9BXT6 1211 aaKnown RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 EGLN1Q9GZT9 426 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 SPATC1LQ9H0A9 340 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 KCNK15Q9H427 330 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 SIX2Q9NPC8 291 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 INTS10Q9NVR2 710 aaKnown RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 COQ3Q9NZJ6 369 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 RHCGQ9UBD6 479 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 ADD3Q9UEY8 706 aaKnown RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 TBC1D29Q9UFV1 150 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 VPS28Q9UK41 221 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 SLC7A7Q9UM01 511 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 KCNJ14Q9UNX9 436 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 ZNF148Q9UQR1 794 aa3.44□□□□□ -1.86
CD46-218ENST00000496723 ZNF644Q9H582 1327 aaPredicted RBP3.44□□□□□ -1.86
CD46-218ENST00000496723 ANKRD18BA2A2Z9 1011 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 GJB3O75712 270 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 TSPAN9O75954 239 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 PLA2G4BP0C869 781 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 CSH1P0DML2 217 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 CSH2P0DML3 217 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 VPREB1P12018 145 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 ARSEP51690 589 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 CLNS1AP54105 237 aaKnown RBP3.43□□□□□ -1.86
CD46-218ENST00000496723 SNX16P57768 344 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 KRTAP10-3P60369 221 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 PMP22Q01453 160 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 CHAF1BQ13112 559 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 WTAPQ15007 396 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 RILPL1Q5EBL4 403 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 HYIQ5T013 277 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 CORO6Q6QEF8 472 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 TMCO3Q6UWJ1 677 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 HAUS6Q7Z4H7 955 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 LDB1Q86U70 411 aaPredicted RBP3.43□□□□□ -1.86
CD46-218ENST00000496723 ADAD2Q8NCV1 583 aaKnown RBP3.43□□□□□ -1.86
CD46-218ENST00000496723 MYADMQ96S97 322 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 C16orf70Q9BSU1 422 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 KIFC3Q9BVG8 833 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 OSGEPL1Q9H4B0 414 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 ACKR4Q9NPB9 350 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 WSB2Q9NYS7 404 aaPredicted RBP3.43□□□□□ -1.86
CD46-218ENST00000496723 PTRH2Q9Y3E5 179 aaKnown RBP3.43□□□□□ -1.86
CD46-218ENST00000496723 RABGAP1Q9Y3P9 1069 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.43□□□□□ -1.86
CD46-218ENST00000496723 STK36Q9NRP7 1315 aa3.43□□□□□ -1.86
CD46-218ENST00000496723 A0A1W2PRB8 838 aa3.42□□□□□ -1.86
CD46-218ENST00000496723 hCG_1807616A0A1W2PRN6 198 aa3.42□□□□□ -1.86
CD46-218ENST00000496723 AVILO75366 819 aa3.42□□□□□ -1.86
CD46-218ENST00000496723 CREG1O75629 220 aa3.42□□□□□ -1.86
CD46-218ENST00000496723 ALOX12P18054 663 aa3.42□□□□□ -1.86
CD46-218ENST00000496723 ITGA3P26006 1051 aa3.42□□□□□ -1.86
CD46-218ENST00000496723 NRIP1P48552 1158 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms