RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SNRPEP62304 92 aaKnown RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 GAGE1Q13065 139 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 GAGE4Q13068 117 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 PRKAA1Q13131 559 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 SCARB2Q14108 478 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 VWC2Q2TAL6 325 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 ZNF718Q3SXZ3 478 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 TTC31Q49AM3 519 aaPredicted RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 KRT80Q6KB66 452 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 C11orf88Q6PI97 169 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 CCNI2Q6ZMN8 369 aaPredicted RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 GLRX5Q86SX6 157 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 IQCHQ86VS3 1027 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 SNX32Q86XE0 403 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 MAP7D3Q8IWC1 876 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 ZNF441Q8N8Z8 693 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 FAM216AQ8WUB2 273 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 PIGTQ969N2 578 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 SPACA9Q96E40 222 aaPredicted RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 OR6C1Q96RD1 312 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 MMTAG2Q9BU76 263 aaKnown RBP3.58□□□□□ -1.84
CLK1-214ENST00000496205 EQTNQ9NQ60 294 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 ABCF3Q9NUQ8 709 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 ZNF224Q9NZL3 707 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 PRAG1Q86YV5 1406 aa3.58□□□□□ -1.84
CLK1-214ENST00000496205 GTPBP10A4D1E9 387 aaKnown RBP3.57□□□□□ -1.84
CLK1-214ENST00000496205 OR5K3A6NET4 321 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 ANKUB1A6NFN9 424 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 TMEM221A6NGB7 291 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 SLC16A5O15375 505 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 ZBTB11O95625 1053 aaPredicted RBP3.57□□□□□ -1.84
CLK1-214ENST00000496205 GLUD1P00367 558 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 QDPRP09417 244 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 CCDC175P0C221 793 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 OR52Z1P0C646 297 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 ATP6V1B1P15313 513 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 MPZP25189 248 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 TLX1P31314 330 aaPredicted RBP3.57□□□□□ -1.84
CLK1-214ENST00000496205 GLUD2P49448 558 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 PDE1BQ01064 536 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 RELQ04864 619 aaPredicted RBP3.57□□□□□ -1.84
CLK1-214ENST00000496205 EEF1A2Q05639 463 aaKnown RBP3.57□□□□□ -1.84
CLK1-214ENST00000496205 TFCP2Q12800 502 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 KIF5AQ12840 1032 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 SF3B4Q15427 424 aaKnown RBP eCLIP3.57□□□□□ -1.841e-8■□□□□ 8.9
CLK1-214ENST00000496205 HYAL4Q2M3T9 481 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 ODF2Q5BJF6 829 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 EFHC1Q5JVL4 640 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 STXBP5Q5T5C0 1151 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 ZDHHC20Q5W0Z9 365 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 CST9LP1Q5W188 147 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 DGLUCYQ7Z3D6 616 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 THNSL1Q8IYQ7 743 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 C1orf52Q8N6N3 182 aaKnown RBP3.57□□□□□ -1.84
CLK1-214ENST00000496205 MSANTD4Q8NCY6 345 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 KIF18AQ8NI77 898 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 THAP6Q8TBB0 222 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 TMEM19Q96HH6 336 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 CFAP57Q96MR6 1250 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 QRFPRQ96P65 431 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 NEK1Q96PY6 1258 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 NOL11Q9H8H0 719 aaKnown RBP3.57□□□□□ -1.84
CLK1-214ENST00000496205 NPAP1Q9NZP6 1156 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 SIX4Q9UIU6 781 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 TUBE1Q9UJT0 475 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 ANAPC5Q9UJX4 755 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 AMDHD2Q9Y303 409 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 SNX5Q9Y5X3 404 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 LIPGQ9Y5X9 500 aa3.57□□□□□ -1.84
CLK1-214ENST00000496205 CKAP5Q14008 2032 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 SOS1Q07889 1333 aaPredicted RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 TEX13DA0A0J9YY54 714 aaPredicted RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 PI4K2BG5E9Z4 385 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 H0YIN7 160 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 XRCC3O43542 346 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 SSX4O60224 188 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 PRAMEF11O60813 436 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 RECQL5O94762 991 aaPredicted RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 PENKP01210 267 aaPredicted RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 LINGO3P0C6S8 592 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 DANCRP0C864 163 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 PFKFB1P16118 471 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 GJA1P17302 382 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 MUTP22033 750 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 TMPOP42166 694 aaKnown RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 CTSCP53634 463 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 DLX5P56178 289 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 DLG1Q12959 904 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 SMC1AQ14683 1233 aaKnown RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 CALCRLQ16602 461 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 CAVIN1Q6NZI2 390 aaKnown RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 SHQ1Q6PI26 577 aaKnown RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 ASB18Q6ZVZ8 466 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 CHST3Q7LGC8 479 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 CCDC186Q7Z3E2 898 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 TMEM173Q86WV6 379 aaPredicted RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 MUC20Q8N307 709 aaPredicted RBP3.56□□□□□ -1.84
CLK1-214ENST00000496205 TSPAN14Q8NG11 270 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 RSPH1Q8WYR4 309 aa3.56□□□□□ -1.84
CLK1-214ENST00000496205 SMPDL3BQ92485 455 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms