RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 UTP15Q8TED0 518 aaKnown RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 PHF21AQ96BD5 680 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 EGLN2Q96KS0 407 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 C7orf26Q96N11 449 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 CHMP4AQ9BY43 222 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 LRMDAQ9H2I8 198 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 UNC45AQ9H3U1 944 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 MARCH4Q9P2E8 410 aaPredicted RBP3.53□□□□□ -1.84
CD46-217ENST00000493796 FBXW11Q9UKB1 542 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 CACNA1SQ13698 1873 aa3.53□□□□□ -1.84
CD46-217ENST00000493796 ZNF831Q5JPB2 1677 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 CCDC189A1A4V9 331 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 CREB3O43889 395 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 NDUFS3O75489 264 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 CCNDBP1O95273 360 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 KCNK5O95279 499 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 EIF2S1P05198 315 aaKnown RBP3.52□□□□□ -1.85
CD46-217ENST00000493796 GM2AP17900 193 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 NAB2Q15742 525 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 CCDC6Q16204 474 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 LRIF1Q5T3J3 769 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 TMTC3Q6ZXV5 915 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 Q75L30 129 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 ADSSL1Q8N142 457 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 TDRD7Q8NHU6 1098 aaKnown RBP3.52□□□□□ -1.85
CD46-217ENST00000493796 GRAPLQ8TC17 118 aaPredicted RBP3.52□□□□□ -1.85
CD46-217ENST00000493796 ARHGEF2Q92974 986 aaKnown RBP3.52□□□□□ -1.85
CD46-217ENST00000493796 ZNF501Q96CX3 271 aaPredicted RBP3.52□□□□□ -1.85
CD46-217ENST00000493796 ST6GAL2Q96JF0 529 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 MTMR10Q9NXD2 777 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 KLHL9Q9P2J3 617 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 LAMB4A4D0S4 1761 aa3.52□□□□□ -1.85
CD46-217ENST00000493796 MAP3K5Q99683 1374 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 BCORQ6W2J9 1755 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 ARFGEF2Q9Y6D5 1785 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 QSER1Q2KHR3 1735 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 DDX60Q8IY21 1712 aaKnown RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 C5orf60A6NFR6 353 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 B4E171 279 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 TMEM178BH3BS89 294 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 J3KRW8 73 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 NTN3O00634 580 aaPredicted RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 PRKNO60260 465 aaPredicted RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 CTSVO60911 334 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 TBX18O95935 607 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 DCTP40126 519 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 TSPAN7P41732 249 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 MPP1Q00013 466 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 TFAP4Q01664 338 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 SREBF2Q12772 1141 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 MED22Q15528 200 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 CEP85LQ5SZL2 805 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 NCEH1Q6PIU2 408 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 GLDNQ6ZMI3 551 aaPredicted RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 TSPAN33Q86UF1 283 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 PM20D2Q8IYS1 436 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 SLC38A9Q8NBW4 561 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 ZNF524Q96C55 264 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 SMC6Q96SB8 1091 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 SEMA3CQ99985 751 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 TMEM39BQ9GZU3 492 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 TFB2MQ9H5Q4 396 aaKnown RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 ZNF696Q9H7X3 374 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 UPF2Q9HAU5 1272 aaKnown RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 IRAK4Q9NWZ3 460 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 MAP3K20Q9NYL2 800 aaKnown RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 EHD2Q9NZN4 543 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 R3HDM2Q9Y2K5 976 aaKnown RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 TMEM184BQ9Y519 407 aaPredicted RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 PIAS3Q9Y6X2 628 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 TNRC6CQ9HCJ0 1690 aaKnown RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 RGPD3A6NKT7 1758 aaPredicted RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 RGPD4Q7Z3J3 1758 aa3.51□□□□□ -1.85
CD46-217ENST00000493796 N4BP2Q86UW6 1770 aaPredicted RBP3.51□□□□□ -1.85
CD46-217ENST00000493796 FANCIQ9NVI1 1328 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 PMS2P5A8MQ11 134 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 ANKRD66B4E2M5 251 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 MAP2K7O14733 419 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 SCAMP1O15126 338 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 BUD23O43709 281 aaKnown RBP3.5□□□□□ -1.85
CD46-217ENST00000493796 EDIL3O43854 480 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 WISP2O76076 250 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 PDE9AO76083 593 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 BAG4O95429 457 aaKnown RBP3.5□□□□□ -1.85
CD46-217ENST00000493796 CGAP01215 116 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 CSF2RAP15509 400 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 CDH2P19022 906 aaPredicted RBP3.5□□□□□ -1.85
CD46-217ENST00000493796 PIK3CAP42336 1068 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 MLLT10P55197 1068 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 ACVR2BQ13705 512 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 RAB6CQ53S08 254 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 ZNF772Q68DY9 489 aaPredicted RBP3.5□□□□□ -1.85
CD46-217ENST00000493796 SLC35E4Q6ICL7 350 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 SLC27A1Q6PCB7 646 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 PIWIL4Q7Z3Z4 852 aaKnown RBP3.5□□□□□ -1.85
CD46-217ENST00000493796 HACE1Q8IYU2 909 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 RASGEF1CQ8N431 466 aa3.5□□□□□ -1.85
CD46-217ENST00000493796 EMC1Q8N766 993 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms