RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TUBGCP3Q96CW5 907 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 TRMT61BQ9BVS5 477 aaKnown RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 PRSS16Q9NQE7 514 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 WWOXQ9NZC7 414 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 SLC7A8Q9UHI5 535 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 MBD1Q9UIS9 605 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 PRPF19Q9UMS4 504 aaKnown RBP13.78□□□□□ -0.2
PTPN7-216ENST00000492977 TIMM22Q9Y584 194 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 ST14Q9Y5Y6 855 aa13.78□□□□□ -0.2
PTPN7-216ENST00000492977 DENND4AQ7Z401 1863 aa13.77□□□□□ -0.2
PTPN7-216ENST00000492977 GFYI3L273 518 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 OR7A17O14581 309 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 NPC1O15118 1278 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 SLCO2B1O94956 709 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 OR4F21O95013 312 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 EPHX1P07099 455 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 PRR35P0CG20 571 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 CD1EP15812 388 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 GGT5P36269 586 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 MTHFRP42898 656 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 PIK3CGP48736 1102 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 CCNG1P51959 295 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 DPTQ07507 201 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 TBL3Q12788 808 aaKnown RBP13.77□□□□□ -0.21
PTPN7-216ENST00000492977 ART3Q13508 389 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 GSTA3Q16772 222 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 C18orf21Q32NC0 220 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-216ENST00000492977 KHDC1Q4VXA5 237 aaKnown RBP13.77□□□□□ -0.21
PTPN7-216ENST00000492977 AGKQ53H12 422 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 XKR7Q5GH72 579 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 UBE2R2Q712K3 238 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-216ENST00000492977 DSELQ8IZU8 1212 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 OR52B6Q8NGF0 335 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 ELMO1Q92556 727 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 FGF14Q92915 247 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 ATP6V1E2Q96A05 226 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 RCN3Q96D15 328 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 CHFRQ96EP1 664 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 CLPTM1LQ96KA5 538 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 MRPL1Q9BYD6 325 aaKnown RBP13.77□□□□□ -0.21
PTPN7-216ENST00000492977 IPPKQ9H8X2 491 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 RIC8BQ9NVN3 520 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 HCN2Q9UL51 889 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 PDE10AQ9Y233 779 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 BTRCQ9Y297 605 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 ANGPTL3Q9Y5C1 460 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 PTGDR2Q9Y5Y4 395 aa13.77□□□□□ -0.21
PTPN7-216ENST00000492977 K7EPI3 171 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 TRANK1O15050 2925 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 ATG13O75143 517 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 STK16O75716 305 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 RECQL5O94762 991 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 SNRPB2P08579 225 aaKnown RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 ALDOCP09972 364 aaKnown RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 HIST1H2AGP0C0S8 130 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 HGFP14210 728 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 IDO1P14902 403 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 HIST1H2ADP20671 130 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 GPX3P22352 226 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 MRPL19P49406 292 aaKnown RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 PRLHRP49683 370 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 HNMTP50135 292 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 ACTR3P61158 418 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 TMEM115Q12893 351 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 GRIK2Q13002 908 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 ENPP2Q13822 863 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 BOP1Q14137 746 aaKnown RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 EGFLAMQ63HQ2 1017 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 LETMD1Q6P1Q0 360 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 MTSS1LQ765P7 747 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 MILR1Q7Z6M3 343 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 MMAAQ8IVH4 418 aaKnown RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 PGAM4Q8N0Y7 254 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 FBXW8Q8N3Y1 598 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 CDYL2Q8N8U2 506 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 RASGEF1AQ8N9B8 481 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 HMGCLL1Q8TB92 370 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 METTL6Q8TCB7 284 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 STMN2Q93045 179 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 NUS1Q96E22 293 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 HIST1H2AHQ96KK5 128 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 SERPINI1Q99574 410 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 HIST1H2AJQ99878 128 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 CCM2Q9BSQ5 444 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 H2AFJQ9BTM1 129 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 SLC25A23Q9BV35 468 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 NTMT1Q9BV86 223 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 FBRSL1Q9HCM7 1045 aaKnown RBP13.76□□□□□ -0.21
PTPN7-216ENST00000492977 CD248Q9HCU0 757 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 ARL15Q9NXU5 204 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 LMCD1Q9NZU5 365 aa13.76□□□□□ -0.21
PTPN7-216ENST00000492977 PABPN1LA6NDY0 278 aaKnown RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 OR2AG2A6NM03 316 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 ARNTLO00327 626 aa13.75□□□□□ -0.21
PTPN7-216ENST00000492977 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-216ENST00000492977 C6P13671 934 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms