RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 SIN3AQ96ST3 1273 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 MAP7D2Q96T17 732 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 TUBB2BQ9BVA1 445 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 NT5C3AQ9H0P0 336 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 CHMP4BQ9H444 224 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 CNGB3Q9NQW8 809 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ANO10Q9NW15 660 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 BABAM1Q9NWV8 329 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 C1RLQ9NZP8 487 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ZNF624Q9P2J8 865 aaPredicted RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 EXTL2Q9UBQ6 330 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 LAMP5Q9UJQ1 280 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 RCOR1Q9UKL0 485 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 PPIEQ9UNP9 301 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 PIN4Q9Y237 131 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 PTRH2Q9Y3E5 179 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 KIF3AQ9Y496 699 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 A0A1W2PRV1 198 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 TCRBV21S2A2A0A5A6 115 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 ARHGEF37A1IGU5 675 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 OR6C76A6NM76 312 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 EDIL3O43854 480 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 SMPD2O60906 423 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 RTN2O75298 545 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 PALMO75781 387 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 BCAS2O75934 225 aaPredicted RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 FYNP06241 537 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 PRSS1P07477 247 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 SUPT20HL2P0C7V6 817 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 GABRB1P18505 474 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 TYMPP19971 482 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 ITGAXP20702 1163 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CASTP20810 708 aaKnown RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 HSPA4P34932 840 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CPOXP36551 454 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 TMPOP42166 694 aaKnown RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 TNNT2P45379 298 aaPredicted RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 CCR10P46092 362 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 ARFIP1P53367 373 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CLDN2P57739 230 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 TUBB4BP68371 445 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 NIPAL4Q0D2K0 466 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 SREBF2Q12772 1141 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 TMED1Q13445 227 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 RCN2Q14257 317 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 HYAL4Q2M3T9 481 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 C15orf59Q2T9L4 293 aaPredicted RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 C14orf177Q52M58 125 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 GKAP1Q5VSY0 366 aaPredicted RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 CST9LP1Q5W188 147 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 OLFM4Q6UX06 510 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 C17orf99Q6UX52 265 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 RRM2BQ7LG56 351 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 ADCK1Q86TW2 530 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 FAM160B2Q86V87 743 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 KBTBD6Q86V97 674 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 WDR63Q8IWG1 891 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 SYCP3Q8IZU3 236 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 SIX6OS1Q8N1H7 587 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 MINDY1Q8N5J2 469 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 RTL3Q8N8U3 475 aaKnown RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 SCCPDHQ8NBX0 429 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 AGBL3Q8NEM8 1001 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 BBS10Q8TAM1 723 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 TMCO6Q96DC7 493 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CDCA5Q96FF9 252 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 DGAT2Q96PD7 388 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 MXRA8Q9BRK3 442 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CRACR2AQ9BSW2 395 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 MLPHQ9BV36 600 aaPredicted RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 FAM129AQ9BZQ8 928 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 KRT23Q9C075 422 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 EGLN1Q9GZT9 426 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CSTL1Q9H114 145 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 ZNF696Q9H7X3 374 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 POLR1BQ9H9Y6 1135 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 SCPEP1Q9HB40 452 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 NINJ2Q9NZG7 142 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CGNQ9P2M7 1197 aaKnown RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 CTNNAL1Q9UBT7 734 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 IL19Q9UHD0 177 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 OSGIN1Q9UJX0 560 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 RALYQ9UKM9 306 aaKnown RBP3.21□□□□□ -1.9
VPS36-205ENST00000492650 HPCAL4Q9UM19 191 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 CARD8Q9Y2G2 431 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 ANGPTL3Q9Y5C1 460 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 SESN1Q9Y6P5 492 aa3.21□□□□□ -1.9
VPS36-205ENST00000492650 TEX13CA0A0J9YWL9 993 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 A0A1W2PQF6 199 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 AKR1B15C9JRZ8 316 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 DVL1O14640 695 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 LDLRAD4O15165 306 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 PAGE4O60829 102 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 SIX3O95343 332 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 TBX6O95947 436 aaPredicted RBP3.2□□□□□ -1.9
VPS36-205ENST00000492650 G6PDP11413 515 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 FGF5P12034 268 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 HLA-DOBP13765 273 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 ERCC2P18074 760 aa3.2□□□□□ -1.9
VPS36-205ENST00000492650 PTPN3P26045 913 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms