RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CCDC88CQ9P219 2028 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ANAPC2Q9UJX6 822 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 POMT2Q9UKY4 750 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 RARRES3Q9UL19 164 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 MRPS18BQ9Y676 258 aaKnown RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 COLEC10Q9Y6Z7 277 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 USP9YO00507 2555 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 OR6C74A6NCV1 312 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 H3BMH7 237 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PYCARD-AS1I3L0S3 204 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 MATN2O00339 956 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 AP2A2O94973 939 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 AP2A1O95782 977 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC35G4P0C7Q5 338 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 EBLN1P0CF75 366 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PRKAR1AP10644 381 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 RALBP11234 206 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 ITGALP20701 1170 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 ACRV1P26436 265 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 ACADLP28330 430 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PTPN4P29074 926 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 AKT1P31749 480 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 RORAP35398 523 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 CETN2P41208 172 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PPM1FP49593 454 aaPredicted RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 CDKN1CP49918 316 aaPredicted RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PMS2P54278 862 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 FOXK1P85037 733 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 TLE1Q04724 770 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 DNASE1L3Q13609 305 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 BOP1Q14137 746 aaKnown RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 SPARCL1Q14515 664 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 KCNAB1Q14722 419 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 DEFB109BQ30KR1 87 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 DNTTIP2Q5QJE6 756 aaKnown RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 CCDC181Q5TID7 509 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 IZUMO3Q5VZ72 239 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PACS1Q6VY07 963 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 DET1Q7L5Y6 550 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 OOSP2Q86WS3 158 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 GAS2L3Q86XJ1 694 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 LURAP1LQ8IV03 231 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 RASGRP3Q8IV61 690 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PIANPQ8IYJ0 282 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 CFAP206Q8IYR0 622 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 FAM71DQ8N9W8 422 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 SIDT2Q8NBJ9 832 aaKnown RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 ACRBPQ8NEB7 543 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 ACVR1CQ8NER5 493 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 C9orf43Q8TAL5 461 aaPredicted RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 CT55Q8WUE5 264 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 STYXQ8WUJ0 223 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 NAT14Q8WUY8 206 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 SEC14L1Q92503 715 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 STAMBPL1Q96FJ0 436 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 SGSM3Q96HU1 749 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 BAG1Q99933 345 aaPredicted RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 FAM118BQ9BPY3 351 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 MVB12BQ9H7P6 319 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 LRRC40Q9H9A6 602 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 SYTL2Q9HCH5 934 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 C1GALT1Q9NS00 363 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 KCND1Q9NSA2 647 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 IMP3Q9NV31 184 aaKnown RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 AMFRQ9UKV5 643 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 RIMKLBQ9ULI2 386 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 R3HDM2Q9Y2K5 976 aaKnown RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 PCDHB3Q9Y5E6 796 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 HEBP2Q9Y5Z4 205 aa8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 CFAP20Q9Y6A4 193 aaKnown RBP8.15□□□□□ -1.1
SMARCB1-207ENST00000491967 A0A0U1RQJ8 604 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 TCRBV7S2A1N4TA0A589 114 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 UBA6A0AVT1 1052 aaPredicted RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 ERI2A8K979 691 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 CFAP99D6REC4 459 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 BTN3A3O00478 584 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 PSMD3O43242 534 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 SUN1O94901 812 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 IPO7O95373 1038 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 POLBP06746 335 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 CAPN1P07384 714 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 TPBGLP0DKB5 382 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 PDHA2P29803 388 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 PRDX3P30048 256 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 STIP1P31948 543 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 MC4RP32245 332 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 CD97P48960 835 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 GDF10P55107 478 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 ACVR1Q04771 509 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 CACNG1Q06432 222 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 OASLQ15646 514 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 DBN1Q16643 649 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 UGT8Q16880 541 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 P3H1Q32P28 736 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 PLEKHS1Q5SXH7 462 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 PAPD7Q5XG87 772 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 DUS1LQ6P1R4 473 aaKnown RBP8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 C16orf46Q6P387 395 aa8.14□□□□□ -1.11
SMARCB1-207ENST00000491967 PEX26Q7Z412 305 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms