RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 NADKO95544 446 aaPredicted RBP3.44□□□□□ -1.86
PHC3-213ENST00000491258 NGFP01138 241 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 EDN1P05305 212 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 LIPFP07098 398 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 EPHA2P29317 976 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 CDAP32320 146 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 PSMC2P35998 433 aaKnown RBP3.44□□□□□ -1.86
PHC3-213ENST00000491258 WNT5AP41221 380 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 CCR10P46092 362 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 SNX16P57768 344 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 PEX6Q13608 980 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 EFR3AQ14156 821 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 FGFBP1Q14512 234 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 BRD3Q15059 726 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 FBXO47Q5MNV8 452 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 Q6ZSR9 355 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 BBS12Q6ZW61 710 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 RSRC2Q7L4I2 434 aaKnown RBP3.44□□□□□ -1.86
PHC3-213ENST00000491258 ISCA2Q86U28 154 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 TMEM143Q96AN5 459 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 KIF1BPQ96EK5 621 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 HARBI1Q96MB7 349 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 FOXN4Q96NZ1 517 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 SLX1AQ9BQ83 275 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 SYT15Q9BQS2 421 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 PIGQQ9BRB3 760 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 SLC6A13Q9NSD5 602 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 KNSTRNQ9Y448 316 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 ABCC6O95255 1503 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 SMG6Q86US8 1419 aaKnown RBP3.44□□□□□ -1.86
PHC3-213ENST00000491258 IGSF1Q8N6C5 1336 aa3.44□□□□□ -1.86
PHC3-213ENST00000491258 LMO7Q8WWI1 1683 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 A0A087WW49 117 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 SEC31AO94979 1220 aaKnown RBP3.43□□□□□ -1.86
PHC3-213ENST00000491258 HSP90AB1P08238 724 aaKnown RBP3.43□□□□□ -1.86
PHC3-213ENST00000491258 TRIM49P0CI25 452 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 TRIM49CP0CI26 452 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 UBA1P22314 1058 aaKnown RBP3.43□□□□□ -1.86
PHC3-213ENST00000491258 NFKBIAP25963 317 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 ARL4CP56559 192 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 ALG11Q2TAA5 492 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 SLC9B1Q4ZJI4 515 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 ZNF530Q6P9A1 599 aaPredicted RBP3.43□□□□□ -1.86
PHC3-213ENST00000491258 Q75L30 129 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 ATG9AQ7Z3C6 839 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 LINC00612Q8N6U2 182 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 PPP4R1Q8TF05 950 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 IGSF8Q969P0 613 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 PPP1R13BQ96KQ4 1090 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 LTB4R2Q9NPC1 389 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.43□□□□□ -1.86
PHC3-213ENST00000491258 IFT172Q9UG01 1749 aa3.43□□□□□ -1.86
PHC3-213ENST00000491258 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 LRRC53A6NM62 1247 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 LDLRAD4O15165 306 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 WISP2O76076 250 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 MMP10P09238 476 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 SP3Q02447 781 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 NDUFAF5Q5TEU4 345 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 PAF1Q8N7H5 531 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 TBC1D20Q96BZ9 403 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 GIMAP5Q96F15 307 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 RRNAD1Q96FB5 475 aaKnown RBP3.42□□□□□ -1.86
PHC3-213ENST00000491258 MPHOSPH6Q99547 160 aaKnown RBP3.42□□□□□ -1.86
PHC3-213ENST00000491258 RTP3Q9BQQ7 232 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 PELI2Q9HAT8 420 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 SLC25A10Q9UBX3 287 aaPredicted RBP3.42□□□□□ -1.86
PHC3-213ENST00000491258 STK39Q9UEW8 545 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 OR14J1Q9UGF5 321 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 KLK13Q9UKR3 277 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 MOB4Q9Y3A3 225 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 NCAPD2Q15021 1401 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 KIF7Q2M1P5 1343 aa3.42□□□□□ -1.86
PHC3-213ENST00000491258 NRAPQ86VF7 1730 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 NWD2Q9ULI1 1742 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 PHRF1Q9P1Y6 1649 aaKnown RBP3.41□□□□□ -1.86
PHC3-213ENST00000491258 PLEKHG2Q9H7P9 1386 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 IGHV4-4A0A075B6R2 117 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 RAF1P04049 648 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 IL7RP16871 459 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 CEBPBP17676 345 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 RFC4P35249 363 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 GRK6P43250 576 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 CRKLP46109 303 aaKnown RBP3.41□□□□□ -1.86
PHC3-213ENST00000491258 UBE3AQ05086 875 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 DCTN2Q13561 401 aaKnown RBP3.41□□□□□ -1.86
PHC3-213ENST00000491258 GRAPQ13588 217 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 UBE4AQ14139 1066 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 MTHFSDQ2M296 383 aaKnown RBP3.41□□□□□ -1.86
PHC3-213ENST00000491258 C1orf141Q5JVX7 400 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 CCT6BQ92526 530 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 LAT2Q9GZY6 243 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 KIF9Q9HAQ2 790 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 MPP6Q9NZW5 540 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 RABGAP1Q9Y3P9 1069 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 KLF2Q9Y5W3 355 aaPredicted RBP3.41□□□□□ -1.86
PHC3-213ENST00000491258 TRPM1Q7Z4N2 1603 aa3.41□□□□□ -1.86
PHC3-213ENST00000491258 KCNK5O95279 499 aa3.4□□□□□ -1.87
PHC3-213ENST00000491258 DUS4LO95620 317 aaKnown RBP3.4□□□□□ -1.87
PHC3-213ENST00000491258 HMOX1P09601 288 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms