RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 EIF3CQ99613 913 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 ZSCAN5AQ9BUG6 496 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 NUP85Q9BW27 656 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 PCDH9Q9HC56 1237 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 DHCR7Q9UBM7 475 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 SLC24A2Q9UI40 661 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 CDC23Q9UJX2 597 aa13.24□□□□□ -0.29
EXOSC3-207ENST00000490516 VPS13CQ709C8 3753 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 INTS1Q8N201 2190 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 HSP90AA1P07900 732 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 CD63P08962 238 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 PVRP15151 417 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 FOSL1P15407 271 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 AMPD1P23109 780 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 MMP11P24347 488 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 CDH6P55285 790 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 GTF3C1Q12789 2109 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 XRCC4Q13426 336 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 INAQ16352 499 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 QPCTQ16769 361 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 KIRREL2Q6UWL6 708 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 CDHR3Q6ZTQ4 885 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 GPR135Q8IZ08 494 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 TRAM1L1Q8N609 369 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 OR4E2Q8NGC2 313 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 ZNF653Q96CK0 615 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 LMF1Q96S06 567 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 INSM2Q96T92 566 aaPredicted RBP13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 POLR1EQ9GZS1 481 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 SPRTNQ9H040 489 aaPredicted RBP13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 ABI3Q9P2A4 366 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 HOOK1Q9UJC3 728 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 TMPRSS11EQ9UL52 423 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 CPAMD8Q8IZJ3 1885 aa13.23□□□□□ -0.29
EXOSC3-207ENST00000490516 COL6A5A8TX70 2615 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 HCRTR1O43613 425 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 F10P00742 488 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 SLC4A1P02730 911 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 CALB1P05937 261 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 UCHL3P15374 230 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 HLA-DPA1P20036 260 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 HCAR3P49019 387 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 TNFSF10P50591 281 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 NFE2L1Q14494 772 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 CEBPEQ15744 281 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 LONRF1Q17RB8 773 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 NKAIN1Q4KMZ8 207 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 TMEM198Q66K66 360 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 RHBDD2Q6NTF9 364 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 CYP4V2Q6ZWL3 525 aaPredicted RBP13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 CXXC5Q7LFL8 322 aaKnown RBP13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 AMZ2Q86W34 360 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 PHF13Q86YI8 300 aaPredicted RBP13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 TEX26Q8N6G2 289 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 STK33Q9BYT3 514 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 GPAMQ9HCL2 828 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 MEMO1Q9Y316 297 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 HS3ST3B1Q9Y662 390 aa13.22□□□□□ -0.29
EXOSC3-207ENST00000490516 TRAV17A0A0B4J275 112 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 GSAPA4D1B5 854 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 H3BMH7 237 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 POP7O75817 140 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 OR2B3O76000 313 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 CRYABP02511 175 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 CTSBP07858 339 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 PRDX3P30048 256 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 DCDC1P59894 354 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 RPL26P61254 145 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 DMPKQ09013 629 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 NIPAL4Q0D2K0 466 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 TMEM115Q12893 351 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 PRKAA1Q13131 559 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 CLEC16AQ2KHT3 1053 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 DEFB110Q30KQ9 67 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 TUBB8Q3ZCM7 444 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 DCUN1D2Q6PH85 259 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 ANKRD20A12PQ8NF67 263 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 PROKR1Q8TCW9 393 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 C12orf66Q96MD2 445 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 NRTNQ99748 197 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 MESP1Q9BRJ9 268 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 WWP1Q9H0M0 922 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 KIR3DX1Q9H7L2 352 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 SLC22A11Q9NSA0 550 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 RPL26L1Q9UNX3 145 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 TTLL3Q9Y4R7 772 aa13.21□□□□□ -0.29
EXOSC3-207ENST00000490516 DYTNA2CJ06 578 aa13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 ANKRD66B4E2M5 251 aa13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 MAP3K7O43318 606 aa13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 RASAL1O95294 804 aa13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 PIRTP0C851 137 aa13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 PSMA2P25787 234 aa13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 PMP22Q01453 160 aa13.2□□□□□ -0.3
EXOSC3-207ENST00000490516 GTF2H3Q13889 308 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms