RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FNDC11Q9BVV2 318 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 DPAGT1Q9H3H5 408 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 GOLPH3LQ9H4A5 285 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 EQTNQ9NQ60 294 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 OLAHQ9NV23 265 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 DONSONQ9NYP3 566 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 BCCIPQ9P287 314 aaKnown RBP eCLIP3.72□□□□□ -1.81
CD46-216ENST00000490278 IL17BQ9UHF5 180 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 GRIP1Q9Y3R0 1128 aa3.72□□□□□ -1.81
CD46-216ENST00000490278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.72□□□□□ -1.81
CD46-216ENST00000490278 MED19A0JLT2 244 aaPredicted RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 ANKUB1A6NFN9 424 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 KRTAP29-1A8MX34 341 aaPredicted RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 IKBKBO14920 756 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 TRUB2O95900 331 aaKnown RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 ATP1A1P05023 1023 aaKnown RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 MYBL1P10243 752 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 PPP5CP53041 499 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 MBTD1Q05BQ5 628 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 PNRC1Q12796 327 aaPredicted RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 PRKAA1Q13131 559 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 ZRSR1Q15695 479 aaKnown RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 LETM2Q2VYF4 491 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 CRY2Q49AN0 593 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 RNASEH2BQ5TBB1 312 aaKnown RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 C6orf163Q5TEZ5 329 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 GDPD4Q6W3E5 623 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 C18orf65Q6ZTR6 163 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 ZNF771Q7L3S4 317 aaPredicted RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 NFE4Q86UQ8 179 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 GPALPP1Q8IXQ4 340 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 TDRD5Q8NAT2 981 aaKnown RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 TEKT4Q8WW24 435 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 SCRN2Q96FV2 425 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 CNDP2Q96KP4 475 aaKnown RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 C17orf77Q96MU5 243 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 OLFM1Q99784 485 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 ABHD6Q9BV23 337 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 RABEP2Q9H5N1 569 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 APOBEC3GQ9HC16 384 aaKnown RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 WWOXQ9NZC7 414 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 CFDP1Q9UEE9 299 aaPredicted RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 KCNG2Q9UJ96 466 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 PROCRQ9UNN8 238 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 NME7Q9Y5B8 376 aa3.71□□□□□ -1.82
CD46-216ENST00000490278 SPIN1Q9Y657 262 aaPredicted RBP3.71□□□□□ -1.82
CD46-216ENST00000490278 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 A0A0B4J293 547 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 EDDM13A0A1B0GTR0 161 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 PRR32B1ATL7 298 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 TCERG1O14776 1098 aaKnown RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 DKC1O60832 514 aaKnown RBP eCLIP3.7□□□□□ -1.82
CD46-216ENST00000490278 CRYAAP02489 173 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 LINGO3P0C6S8 592 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 CKMT2P17540 419 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 CBLP22681 906 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 CPT2P23786 658 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 EEF1DP29692 281 aaKnown RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 ZNF75DP51815 510 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 DLX5P56178 289 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 ARL16Q0P5N6 197 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 HSPB3Q12988 150 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 MFAP5Q13361 173 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 TCP11X2Q5H9J9 407 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 GRTP1Q5TC63 336 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 KRT80Q6KB66 452 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 ZNF595Q8IYB9 648 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 PPFIBP2Q8ND30 876 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 SLC24A4Q8NFF2 622 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 NXNL1Q96CM4 212 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 ARSGQ96EG1 525 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 LMLNQ96KR4 655 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 BAG1Q99933 345 aaPredicted RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 LMF2Q9BU23 707 aaKnown RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 TRMT61BQ9BVS5 477 aaKnown RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 GPR88Q9GZN0 384 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 WNT5BQ9H1J7 359 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 OPA3Q9H6K4 179 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 ANKZF1Q9H8Y5 726 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 TBC1D17Q9HA65 648 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 UPF2Q9HAU5 1272 aaKnown RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 PIH1D3Q9NQM4 214 aaKnown RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 SLC38A7Q9NVC3 462 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 OSER1Q9NX31 292 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 STK26Q9P289 416 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 WDR35Q9P2L0 1181 aa3.7□□□□□ -1.82
CD46-216ENST00000490278 FAF1Q9UNN5 650 aaPredicted RBP3.7□□□□□ -1.82
CD46-216ENST00000490278 A8MXE2 369 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 PRSS44E7EML9 344 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 BMPR1BO00238 502 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 XPNPEP2O43895 674 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 SYNCRIPO60506 623 aaKnown RBP3.69□□□□□ -1.82
CD46-216ENST00000490278 TBX10O75333 385 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 TOMM70O94826 608 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 GGPS1O95749 300 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 OR2T7P0C7T2 308 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 DANCRP0C864 163 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 ACP2P11117 423 aa3.69□□□□□ -1.82
CD46-216ENST00000490278 MARK3P27448 753 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms