RNA–Protein interactions for RNA: ENST00000488965.1

SCP2-212, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-212ENST00000488965 ATG2BQ96BY7 2078 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 MICAL3Q7RTP6 2002 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 KNTC1P50748 2209 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3DA0A087WVF3 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3IA0A087WXS9 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3EA0A087X179 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3KA0A087X1G2 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3FA6NER0 549 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 ANKDD1BA6NHY2 528 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 LOC730098B7Z3J9 87 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3LB9A6J9 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 SNNO75324 88 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 ZBTB11O95625 1053 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 LYNP07948 512 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3HP0C7X1 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ACADMP11310 421 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 HNF1BP35680 557 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 NSG1P42857 185 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 CTSOP43234 321 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 YAP1P46937 504 aaKnown RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 LEPRP48357 1165 aaKnown RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 POLD2P49005 469 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 C1QTNF8P60827 252 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 DSC1Q08554 894 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 UNC50Q53HI1 259 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 CARD16Q5EG05 197 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ACBD5Q5T8D3 534 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3GQ6DHY5 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3CQ6IPX1 549 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 C22orf39Q6P5X5 142 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ZC3H7AQ8IWR0 971 aaKnown RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 MICU2Q8IYU8 434 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D3Q8IZP1 549 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 ACTRT2Q8TDY3 377 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 LINC01599Q8WXQ3 324 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 COQ10BQ9H8M1 238 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 DNAJC11Q9NVH1 559 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 MARCH5Q9NX47 278 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ADGRE2Q9UHX3 823 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 SHROOM3Q8TF72 1996 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 PLK4O00444 970 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TNFAIP8O95379 198 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 CLDN9O95484 217 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ADH1CP00326 375 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 IGLV3-25P01717 112 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 HSMCR30P0CW71 290 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 UQCRBP14927 111 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 CDH2P19022 906 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 PRDX3P30048 256 aaKnown RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 VIPR2P41587 438 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 IDH2P48735 452 aaKnown RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 FOXA1P55317 472 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 RFTN1Q14699 578 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 MYLK3Q32MK0 819 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 FGD3Q5JSP0 725 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ASRGL1Q7L266 308 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 GALNT5Q7Z7M9 940 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 DSG4Q86SJ6 1040 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ISCA2Q86U28 154 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 CHST14Q8NCH0 376 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 SNRNP27Q8WVK2 155 aaKnown RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 LZICQ8WZA0 190 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 MYEOVQ96EZ4 313 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 AURKBQ96GD4 344 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 MPP4Q96JB8 637 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 PKP2Q99959 881 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 C9orf16Q9BUW7 83 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 ZBTB26Q9HCK0 441 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 NUDT4Q9NZJ9 180 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 C6orf203Q9P0P8 240 aaPredicted RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 TBC1D14Q9P2M4 693 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 CNOT6Q9ULM6 557 aaKnown RBP6.77□□□□□ -1.33
SCP2-212ENST00000488965 NEU3Q9UQ49 428 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 MYRFQ9Y2G1 1151 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 RNF11Q9Y3C5 154 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 INSL6Q9Y581 213 aa6.77□□□□□ -1.33
SCP2-212ENST00000488965 TRIOBPQ9H2D6 2365 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 SEC16AO15027 2179 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 LDB2O43679 373 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 CST1P01037 141 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 RHOP08100 348 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 G6PDP11413 515 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 CD1DP15813 335 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 NR4A1P22736 598 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 IFNA8P32881 189 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 HTR6P50406 440 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 PRMT2P55345 433 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 LSM3P62310 102 aaKnown RBP6.76□□□□□ -1.33
SCP2-212ENST00000488965 ALDH6A1Q02252 535 aaKnown RBP6.76□□□□□ -1.33
SCP2-212ENST00000488965 TP53BP2Q13625 1128 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 PTGR1Q14914 329 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 PTCHD3Q3KNS1 767 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 SFT2D3Q587I9 215 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 GPRC6AQ5T6X5 926 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 GDPD4Q6W3E5 623 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 CYS1Q717R9 158 aa6.76□□□□□ -1.33
SCP2-212ENST00000488965 CHST15Q7LFX5 561 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms